Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RPL39P62891 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC1.86□□□□□ -2.11
RPL39P62891 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC1.86□□□□□ -2.11
RPL39P62891 MIR4697-201ENST00000582977 78 ntBASIC1.86□□□□□ -2.11
RPL39P62891 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.86□□□□□ -2.11
RPL39P62891 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.86□□□□□ -2.11
RPL39P62891 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC1.86□□□□□ -2.11
RPL39P62891 MIR7975-201ENST00000619350 68 ntBASIC1.86□□□□□ -2.11
RPL39P62891 AC010297.1-201ENST00000623948 149 ntBASIC1.86□□□□□ -2.11
RPL39P62891 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC1.86□□□□□ -2.11
RPL39P62891 FTO-223ENST00000640179 210 ntTSL 5 BASIC1.86□□□□□ -2.11
RPL39P62891 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
RPL39P62891 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC1.86□□□□□ -2.11
RPL39P62891 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RPL39P62891 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RPL39P62891 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPL39P62891 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPL39P62891 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPL39P62891 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC1.85□□□□□ -2.11
RPL39P62891 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC1.85□□□□□ -2.11
RPL39P62891 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPL39P62891 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPL39P62891 SNORA62.3-201ENST00000365110 153 ntBASIC1.85□□□□□ -2.11
RPL39P62891 SNORA48.5-201ENST00000391143 135 ntBASIC1.85□□□□□ -2.11
RPL39P62891 ERMN-204ENST00000409925 556 ntTSL 4 BASIC1.85□□□□□ -2.11
RPL39P62891 Y_RNA.625-201ENST00000411256 107 ntBASIC1.85□□□□□ -2.11
RPL39P62891 AC092638.1-201ENST00000411966 1275 ntBASIC1.85□□□□□ -2.11
RPL39P62891 GCA-203ENST00000429691 824 ntTSL 3 BASIC1.85□□□□□ -2.11
RPL39P62891 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.85□□□□□ -2.11
RPL39P62891 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC1.85□□□□□ -2.11
RPL39P62891 RPL23AP31-201ENST00000456160 467 ntBASIC1.85□□□□□ -2.11
RPL39P62891 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC1.85□□□□□ -2.11
RPL39P62891 RN7SL601P-201ENST00000471221 293 ntBASIC1.85□□□□□ -2.11
RPL39P62891 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.85□□□□□ -2.11
RPL39P62891 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC1.85□□□□□ -2.11
RPL39P62891 PTGES3P3-201ENST00000511479 482 ntBASIC1.85□□□□□ -2.11
RPL39P62891 CKS1BP7-201ENST00000522230 235 ntBASIC1.85□□□□□ -2.11
RPL39P62891 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1.85□□□□□ -2.11
RPL39P62891 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.85□□□□□ -2.11
RPL39P62891 H3F3AP1-201ENST00000559984 334 ntBASIC1.85□□□□□ -2.11
RPL39P62891 AC093227.2-201ENST00000589357 285 ntBASIC1.85□□□□□ -2.11
RPL39P62891 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.85□□□□□ -2.11
RPL39P62891 AC006539.2-201ENST00000601729 572 ntBASIC1.85□□□□□ -2.11
RPL39P62891 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC1.85□□□□□ -2.11
RPL39P62891 AL451074.6-201ENST00000608512 729 ntBASIC1.85□□□□□ -2.11
RPL39P62891 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC1.85□□□□□ -2.11
RPL39P62891 C2orf27A-204ENST00000623058 969 ntBASIC1.85□□□□□ -2.11
RPL39P62891 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPL39P62891 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPL39P62891 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPL39P62891 ZNF807-201ENST00000328088 1707 ntBASIC1.85□□□□□ -2.11
RPL39P62891 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC1.85□□□□□ -2.11
RPL39P62891 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
RPL39P62891 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.11
RPL39P62891 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
RPL39P62891 CUL1P1-201ENST00000509510 2425 ntBASIC1.84□□□□□ -2.11
RPL39P62891 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
RPL39P62891 MIR142-201ENST00000384835 87 ntBASIC1.84□□□□□ -2.11
RPL39P62891 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RPL39P62891 AL034403.1-201ENST00000399414 885 ntBASIC1.84□□□□□ -2.11
RPL39P62891 AL592148.1-201ENST00000413568 445 ntBASIC1.84□□□□□ -2.11
RPL39P62891 LINC01881-201ENST00000416103 412 ntBASIC1.84□□□□□ -2.11
RPL39P62891 AC073310.1-201ENST00000423226 1033 ntBASIC1.84□□□□□ -2.11
RPL39P62891 PRDX3P3-201ENST00000447765 522 ntBASIC1.84□□□□□ -2.11
RPL39P62891 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RPL39P62891 AC078817.1-201ENST00000492623 435 ntBASIC1.84□□□□□ -2.11
RPL39P62891 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC1.84□□□□□ -2.11
RPL39P62891 WBP1LP4-201ENST00000505043 344 ntBASIC1.84□□□□□ -2.11
RPL39P62891 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RPL39P62891 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC1.84□□□□□ -2.11
RPL39P62891 RN7SKP282-201ENST00000516824 299 ntBASIC1.84□□□□□ -2.11
RPL39P62891 RN7SKP57-201ENST00000517248 293 ntBASIC1.84□□□□□ -2.11
RPL39P62891 DUXAP2-201ENST00000519198 589 ntBASIC1.84□□□□□ -2.11
RPL39P62891 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC1.84□□□□□ -2.11
RPL39P62891 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.84□□□□□ -2.11
RPL39P62891 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC1.84□□□□□ -2.11
RPL39P62891 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RPL39P62891 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.84□□□□□ -2.11
RPL39P62891 AC007954.1-201ENST00000554198 494 ntBASIC1.84□□□□□ -2.11
RPL39P62891 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC1.84□□□□□ -2.11
RPL39P62891 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC1.84□□□□□ -2.11
RPL39P62891 AC124312.4-201ENST00000605533 310 ntBASIC1.84□□□□□ -2.11
RPL39P62891 AC131902.3-201ENST00000611767 581 ntBASIC1.84□□□□□ -2.11
RPL39P62891 AL162274.2-201ENST00000614406 332 ntBASIC1.84□□□□□ -2.11
RPL39P62891 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.84□□□□□ -2.11
RPL39P62891 MIR6810-201ENST00000622701 70 ntBASIC1.84□□□□□ -2.11
RPL39P62891 AC079228.1-201ENST00000624774 1049 ntBASIC1.84□□□□□ -2.11
RPL39P62891 Z82195.2-201ENST00000612348 18351 ntBASIC1.84□□□□□ -2.11
RPL39P62891 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RPL39P62891 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC1.84□□□□□ -2.12
RPL39P62891 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC1.84□□□□□ -2.12
RPL39P62891 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
RPL39P62891 AL355596.1-201ENST00000565399 3996 ntBASIC1.83□□□□□ -2.12
RPL39P62891 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.83□□□□□ -2.12
RPL39P62891 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RPL39P62891 AL672167.1-206ENST00000356293 943 ntBASIC1.83□□□□□ -2.12
RPL39P62891 RNA5SP267-201ENST00000364893 126 ntBASIC1.83□□□□□ -2.12
RPL39P62891 EIF5P1-201ENST00000400019 1231 ntBASIC1.83□□□□□ -2.12
RPL39P62891 SNORA11C-201ENST00000408532 129 ntBASIC1.83□□□□□ -2.12
RPL39P62891 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms