Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 MTND2P26-201ENST00000528255 1029 ntBASIC3.4□□□□□ -1.87
LIM2P55344 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.4□□□□□ -1.87
LIM2P55344 MTCYBP28-201ENST00000566728 1132 ntBASIC3.4□□□□□ -1.87
LIM2P55344 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.4□□□□□ -1.87
LIM2P55344 BNIP3P27-201ENST00000599991 412 ntBASIC3.4□□□□□ -1.87
LIM2P55344 AC011492.1-201ENST00000600023 315 ntBASIC3.4□□□□□ -1.87
LIM2P55344 Z82195.1-201ENST00000604558 398 ntBASIC3.4□□□□□ -1.87
LIM2P55344 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.4□□□□□ -1.87
LIM2P55344 VN1R74P-201ENST00000613259 503 ntBASIC3.4□□□□□ -1.87
LIM2P55344 AC069209.1-201ENST00000619282 651 ntBASIC3.4□□□□□ -1.87
LIM2P55344 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.4□□□□□ -1.87
LIM2P55344 AC126544.2-201ENST00000625174 749 ntBASIC3.4□□□□□ -1.87
LIM2P55344 AC012442.3-202ENST00000636742 206 ntBASIC3.4□□□□□ -1.87
LIM2P55344 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
LIM2P55344 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
LIM2P55344 AL122126.1-201ENST00000546905 1318 ntBASIC3.4□□□□□ -1.87
LIM2P55344 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
LIM2P55344 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.4□□□□□ -1.87
LIM2P55344 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.39□□□□□ -1.87
LIM2P55344 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LIM2P55344 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LIM2P55344 AC090337.1-201ENST00000579651 2074 ntBASIC3.39□□□□□ -1.87
LIM2P55344 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LIM2P55344 RNA5SP42-201ENST00000364278 115 ntBASIC3.39□□□□□ -1.87
LIM2P55344 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.39□□□□□ -1.87
LIM2P55344 AL359837.1-201ENST00000381357 287 ntBASIC3.39□□□□□ -1.87
LIM2P55344 RNU6-444P-201ENST00000383988 108 ntBASIC3.39□□□□□ -1.87
LIM2P55344 DSTNP4-201ENST00000399472 474 ntBASIC3.39□□□□□ -1.87
LIM2P55344 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.39□□□□□ -1.87
LIM2P55344 RPS3AP9-201ENST00000417027 792 ntBASIC3.39□□□□□ -1.87
LIM2P55344 SYF2P2-201ENST00000417620 583 ntBASIC3.39□□□□□ -1.87
LIM2P55344 RPS15AP40-201ENST00000419621 391 ntBASIC3.39□□□□□ -1.87
LIM2P55344 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.39□□□□□ -1.87
LIM2P55344 AC006989.1-201ENST00000427212 131 ntBASIC3.39□□□□□ -1.87
LIM2P55344 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.39□□□□□ -1.87
LIM2P55344 SDR42E1P3-201ENST00000438345 502 ntBASIC3.39□□□□□ -1.87
LIM2P55344 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.39□□□□□ -1.87
LIM2P55344 Z77249.1-201ENST00000444622 1175 ntBASIC3.39□□□□□ -1.87
LIM2P55344 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
LIM2P55344 RPL29P29-201ENST00000448725 423 ntBASIC3.39□□□□□ -1.87
LIM2P55344 PPIAP3-201ENST00000450588 505 ntBASIC3.39□□□□□ -1.87
LIM2P55344 AL645939.1-201ENST00000453429 797 ntBASIC3.39□□□□□ -1.87
LIM2P55344 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.39□□□□□ -1.87
LIM2P55344 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
LIM2P55344 SNORD105B-201ENST00000458770 79 ntBASIC3.39□□□□□ -1.87
LIM2P55344 RPL7P15-201ENST00000461190 712 ntBASIC3.39□□□□□ -1.87
LIM2P55344 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.39□□□□□ -1.87
LIM2P55344 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.39□□□□□ -1.87
LIM2P55344 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.39□□□□□ -1.87
LIM2P55344 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LIM2P55344 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.39□□□□□ -1.87
LIM2P55344 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.39□□□□□ -1.87
LIM2P55344 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.39□□□□□ -1.87
LIM2P55344 AC023825.1-201ENST00000566704 1030 ntBASIC3.39□□□□□ -1.87
LIM2P55344 AC090666.1-201ENST00000578241 445 ntBASIC3.39□□□□□ -1.87
LIM2P55344 MIR3908-201ENST00000579798 126 ntBASIC3.39□□□□□ -1.87
LIM2P55344 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.39□□□□□ -1.87
LIM2P55344 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.39□□□□□ -1.87
LIM2P55344 AC020914.6-201ENST00000594327 272 ntBASIC3.39□□□□□ -1.87
LIM2P55344 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.39□□□□□ -1.87
LIM2P55344 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.39□□□□□ -1.87
LIM2P55344 AC010591.1-201ENST00000603941 649 ntBASIC3.39□□□□□ -1.87
LIM2P55344 AC113194.1-201ENST00000606037 500 ntBASIC3.39□□□□□ -1.87
LIM2P55344 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.39□□□□□ -1.87
LIM2P55344 AC093673.2-201ENST00000609674 331 ntBASIC3.39□□□□□ -1.87
LIM2P55344 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LIM2P55344 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.39□□□□□ -1.87
LIM2P55344 AL356489.2-201ENST00000566968 3528 ntBASIC3.39□□□□□ -1.87
LIM2P55344 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LIM2P55344 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
LIM2P55344 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LIM2P55344 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LIM2P55344 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LIM2P55344 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LIM2P55344 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LIM2P55344 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
LIM2P55344 U3.15-201ENST00000365398 212 ntBASIC3.38□□□□□ -1.87
LIM2P55344 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LIM2P55344 MIR708-201ENST00000390708 88 ntBASIC3.38□□□□□ -1.87
LIM2P55344 RNU6-1176P-201ENST00000390955 107 ntBASIC3.38□□□□□ -1.87
LIM2P55344 RNU6-1000P-201ENST00000391066 106 ntBASIC3.38□□□□□ -1.87
LIM2P55344 BTBD10P2-201ENST00000404779 676 ntBASIC3.38□□□□□ -1.87
LIM2P55344 AC092638.1-201ENST00000411966 1275 ntBASIC3.38□□□□□ -1.87
LIM2P55344 AC004987.3-201ENST00000413879 771 ntBASIC3.38□□□□□ -1.87
LIM2P55344 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.38□□□□□ -1.87
LIM2P55344 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.38□□□□□ -1.87
LIM2P55344 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.38□□□□□ -1.87
LIM2P55344 MRPS18BP2-201ENST00000434310 759 ntBASIC3.38□□□□□ -1.87
LIM2P55344 B3GNT2P1-201ENST00000434960 952 ntBASIC3.38□□□□□ -1.87
LIM2P55344 AC234064.1-201ENST00000436312 247 ntBASIC3.38□□□□□ -1.87
LIM2P55344 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.38□□□□□ -1.87
LIM2P55344 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.38□□□□□ -1.87
LIM2P55344 ANP32BP2-201ENST00000454525 545 ntBASIC3.38□□□□□ -1.87
LIM2P55344 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.38□□□□□ -1.87
LIM2P55344 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.38□□□□□ -1.87
LIM2P55344 AC087385.1-201ENST00000475062 312 ntBASIC3.38□□□□□ -1.87
LIM2P55344 S100A11P1-201ENST00000477525 312 ntBASIC3.38□□□□□ -1.87
LIM2P55344 GAPDHP39-201ENST00000481866 979 ntBASIC3.38□□□□□ -1.87
LIM2P55344 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.38□□□□□ -1.87
LIM2P55344 PCBP2P3-201ENST00000509726 843 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms