Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SLC31A1P1-201ENST00000451221 567 ntBASIC3.95□□□□□ -1.78
CDH13P55290 RPL21P134-201ENST00000453468 483 ntBASIC3.95□□□□□ -1.78
CDH13P55290 RN7SL303P-201ENST00000469773 251 ntBASIC3.95□□□□□ -1.78
CDH13P55290 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH13P55290 AC022034.3-201ENST00000471393 478 ntBASIC3.95□□□□□ -1.78
CDH13P55290 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH13P55290 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
CDH13P55290 AC146944.2-203ENST00000502493 354 ntBASIC3.95□□□□□ -1.78
CDH13P55290 AC108475.1-201ENST00000507880 950 ntBASIC3.95□□□□□ -1.78
CDH13P55290 AC139495.1-202ENST00000513164 354 ntBASIC3.95□□□□□ -1.78
CDH13P55290 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.95□□□□□ -1.78
CDH13P55290 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH13P55290 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.95□□□□□ -1.78
CDH13P55290 AC008127.2-201ENST00000549925 1075 ntBASIC3.95□□□□□ -1.78
CDH13P55290 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.95□□□□□ -1.78
CDH13P55290 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH13P55290 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH13P55290 AC025627.2-201ENST00000576220 160 ntBASIC3.95□□□□□ -1.78
CDH13P55290 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH13P55290 AC234772.3-201ENST00000602277 528 ntBASIC3.95□□□□□ -1.78
CDH13P55290 AC022022.2-201ENST00000602989 360 ntBASIC3.95□□□□□ -1.78
CDH13P55290 AL355812.1-201ENST00000603215 216 ntBASIC3.95□□□□□ -1.78
CDH13P55290 AC083899.3-201ENST00000603413 594 ntBASIC3.95□□□□□ -1.78
CDH13P55290 AL356218.2-201ENST00000605264 187 ntBASIC3.95□□□□□ -1.78
CDH13P55290 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.95□□□□□ -1.78
CDH13P55290 AC114781.5-201ENST00000615297 108 ntBASIC3.95□□□□□ -1.78
CDH13P55290 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH13P55290 LINC02471-203ENST00000641941 4752 ntBASIC3.95□□□□□ -1.78
CDH13P55290 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CDH13P55290 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
CDH13P55290 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH13P55290 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH13P55290 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH13P55290 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH13P55290 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH13P55290 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH13P55290 FAM3C2-201ENST00000312214 681 ntBASIC3.94□□□□□ -1.78
CDH13P55290 RNA5SP366-201ENST00000365454 123 ntBASIC3.94□□□□□ -1.78
CDH13P55290 Y_RNA.408-201ENST00000383987 102 ntBASIC3.94□□□□□ -1.78
CDH13P55290 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CDH13P55290 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH13P55290 AL450338.1-201ENST00000407987 512 ntBASIC3.94□□□□□ -1.78
CDH13P55290 AC068533.2-201ENST00000411872 306 ntBASIC3.94□□□□□ -1.78
CDH13P55290 RPS24P7-201ENST00000416921 246 ntBASIC3.94□□□□□ -1.78
CDH13P55290 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH13P55290 MTCYBP24-201ENST00000420387 1106 ntBASIC3.94□□□□□ -1.78
CDH13P55290 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH13P55290 XKRYP1-201ENST00000423438 492 ntBASIC3.94□□□□□ -1.78
CDH13P55290 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH13P55290 AC087650.1-201ENST00000431445 468 ntBASIC3.94□□□□□ -1.78
CDH13P55290 XKRYP2-201ENST00000432915 492 ntBASIC3.94□□□□□ -1.78
CDH13P55290 BTF3P10-201ENST00000433415 495 ntBASIC3.94□□□□□ -1.78
CDH13P55290 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH13P55290 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH13P55290 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH13P55290 RPS4XP4-201ENST00000443195 763 ntBASIC3.94□□□□□ -1.78
CDH13P55290 VN1R10P-201ENST00000447106 875 ntBASIC3.94□□□□□ -1.78
CDH13P55290 USP9YP25-201ENST00000457708 443 ntBASIC3.94□□□□□ -1.78
CDH13P55290 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.94□□□□□ -1.78
CDH13P55290 RPL7P1-201ENST00000468161 747 ntBASIC3.94□□□□□ -1.78
CDH13P55290 RPL7P9-201ENST00000468715 747 ntBASIC3.94□□□□□ -1.78
CDH13P55290 AL136126.1-201ENST00000473603 402 ntBASIC3.94□□□□□ -1.78
CDH13P55290 RN7SL459P-201ENST00000481078 302 ntBASIC3.94□□□□□ -1.78
CDH13P55290 OR5H5P-201ENST00000503164 928 ntBASIC3.94□□□□□ -1.78
CDH13P55290 AC109458.1-201ENST00000508858 316 ntBASIC3.94□□□□□ -1.78
CDH13P55290 AC116353.3-201ENST00000511215 249 ntBASIC3.94□□□□□ -1.78
CDH13P55290 AP001636.2-201ENST00000525517 696 ntBASIC3.94□□□□□ -1.78
CDH13P55290 SLC2A13P1-201ENST00000531560 322 ntBASIC3.94□□□□□ -1.78
CDH13P55290 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.94□□□□□ -1.78
CDH13P55290 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH13P55290 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH13P55290 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH13P55290 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH13P55290 AC022968.1-201ENST00000567372 442 ntBASIC3.94□□□□□ -1.78
CDH13P55290 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH13P55290 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH13P55290 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.94□□□□□ -1.78
CDH13P55290 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH13P55290 MIR5684-201ENST00000585074 65 ntBASIC3.94□□□□□ -1.78
CDH13P55290 AC068790.4-201ENST00000602474 263 ntBASIC3.94□□□□□ -1.78
CDH13P55290 AC113368.1-201ENST00000603736 382 ntBASIC3.94□□□□□ -1.78
CDH13P55290 AL159169.3-201ENST00000608871 561 ntBASIC3.94□□□□□ -1.78
CDH13P55290 MIR6820-201ENST00000611508 62 ntBASIC3.94□□□□□ -1.78
CDH13P55290 AL354976.1-201ENST00000613843 387 ntBASIC3.94□□□□□ -1.78
CDH13P55290 AC004825.2-201ENST00000616634 455 ntBASIC3.94□□□□□ -1.78
CDH13P55290 MIR7151-201ENST00000617477 60 ntBASIC3.94□□□□□ -1.78
CDH13P55290 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH13P55290 AC092184.1-201ENST00000625042 715 ntBASIC3.94□□□□□ -1.78
CDH13P55290 MIR4278-201ENST00000636094 69 ntBASIC3.94□□□□□ -1.78
CDH13P55290 FAM35DP-201ENST00000323387 2712 ntBASIC3.94□□□□□ -1.78
CDH13P55290 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH13P55290 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH13P55290 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH13P55290 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH13P55290 AL031985.3-201ENST00000565390 2449 ntBASIC3.94□□□□□ -1.78
CDH13P55290 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CDH13P55290 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH13P55290 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH13P55290 GDI2P1-201ENST00000429312 1336 ntBASIC3.94□□□□□ -1.78
CDH13P55290 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms