Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.99□□□□□ -1.93
BRCA2P51587 TCP11X3P-202ENST00000514289 1254 ntBASIC2.99□□□□□ -1.93
BRCA2P51587 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.99□□□□□ -1.93
BRCA2P51587 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
BRCA2P51587 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC2.99□□□□□ -1.93
BRCA2P51587 CYCSP20-201ENST00000473154 315 ntBASIC2.99□□□□□ -1.93
BRCA2P51587 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.99□□□□□ -1.93
BRCA2P51587 AC113430.1-201ENST00000506872 718 ntBASIC2.99□□□□□ -1.93
BRCA2P51587 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.99□□□□□ -1.93
BRCA2P51587 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.99□□□□□ -1.93
BRCA2P51587 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
BRCA2P51587 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.99□□□□□ -1.93
BRCA2P51587 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
BRCA2P51587 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
BRCA2P51587 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
BRCA2P51587 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC2.98□□□□□ -1.93
BRCA2P51587 SRIP1-201ENST00000489235 288 ntBASIC2.98□□□□□ -1.93
BRCA2P51587 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.98□□□□□ -1.93
BRCA2P51587 AL356490.1-201ENST00000623079 479 ntBASIC2.98□□□□□ -1.93
BRCA2P51587 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
BRCA2P51587 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
BRCA2P51587 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.98□□□□□ -1.93
BRCA2P51587 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC2.98□□□□□ -1.93
BRCA2P51587 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
BRCA2P51587 AL049610.1-201ENST00000423374 372 ntBASIC2.98□□□□□ -1.93
BRCA2P51587 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.98□□□□□ -1.93
BRCA2P51587 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.98□□□□□ -1.93
BRCA2P51587 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
BRCA2P51587 AC116337.1-201ENST00000509680 687 ntBASIC2.98□□□□□ -1.93
BRCA2P51587 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.98□□□□□ -1.93
BRCA2P51587 GABRG2-229ENST00000641017 3628 ntBASIC2.98□□□□□ -1.93
BRCA2P51587 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
BRCA2P51587 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
BRCA2P51587 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC2.97□□□□□ -1.93
BRCA2P51587 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.97□□□□□ -1.93
BRCA2P51587 AC092013.1-201ENST00000438795 332 ntBASIC2.97□□□□□ -1.93
BRCA2P51587 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC2.97□□□□□ -1.93
BRCA2P51587 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
BRCA2P51587 AC022069.1-201ENST00000582910 658 ntBASIC2.97□□□□□ -1.93
BRCA2P51587 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.97□□□□□ -1.93
BRCA2P51587 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
BRCA2P51587 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
BRCA2P51587 AC107081.3-201ENST00000612715 2034 ntBASIC2.97□□□□□ -1.93
BRCA2P51587 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC2.97□□□□□ -1.93
BRCA2P51587 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.97□□□□□ -1.93
BRCA2P51587 RNU6-618P-201ENST00000363518 112 ntBASIC2.97□□□□□ -1.93
BRCA2P51587 RPL23AP36-201ENST00000413895 458 ntBASIC2.97□□□□□ -1.93
BRCA2P51587 AL135786.1-201ENST00000415892 214 ntBASIC2.97□□□□□ -1.93
BRCA2P51587 RPL9P6-201ENST00000492764 598 ntBASIC2.97□□□□□ -1.93
BRCA2P51587 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.97□□□□□ -1.93
BRCA2P51587 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
BRCA2P51587 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.97□□□□□ -1.93
BRCA2P51587 AC005539.1-201ENST00000443768 1479 ntBASIC2.97□□□□□ -1.93
BRCA2P51587 AC092593.1-201ENST00000515413 1815 ntBASIC2.97□□□□□ -1.93
BRCA2P51587 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.97□□□□□ -1.93
BRCA2P51587 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
BRCA2P51587 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
BRCA2P51587 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
BRCA2P51587 AL591623.2-201ENST00000449978 222 ntBASIC2.97□□□□□ -1.93
BRCA2P51587 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC2.97□□□□□ -1.93
BRCA2P51587 Y_RNA.670-201ENST00000516255 105 ntBASIC2.97□□□□□ -1.93
BRCA2P51587 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
BRCA2P51587 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
BRCA2P51587 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC2.96□□□□□ -1.94
BRCA2P51587 HIGD1AP2-201ENST00000446367 280 ntBASIC2.96□□□□□ -1.94
BRCA2P51587 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.96□□□□□ -1.94
BRCA2P51587 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.96□□□□□ -1.94
BRCA2P51587 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.96□□□□□ -1.94
BRCA2P51587 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC2.96□□□□□ -1.94
BRCA2P51587 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
BRCA2P51587 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
BRCA2P51587 AL590290.1-201ENST00000405336 380 ntBASIC2.96□□□□□ -1.94
BRCA2P51587 PTP4A1P5-201ENST00000420305 455 ntBASIC2.96□□□□□ -1.94
BRCA2P51587 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC2.96□□□□□ -1.94
BRCA2P51587 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
BRCA2P51587 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
BRCA2P51587 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
BRCA2P51587 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.96□□□□□ -1.94
BRCA2P51587 ISCA1P2-201ENST00000438679 421 ntBASIC2.96□□□□□ -1.94
BRCA2P51587 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.96□□□□□ -1.94
BRCA2P51587 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.96□□□□□ -1.94
BRCA2P51587 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.96□□□□□ -1.94
BRCA2P51587 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
BRCA2P51587 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
BRCA2P51587 Y_RNA.116-201ENST00000363292 103 ntBASIC2.95□□□□□ -1.94
BRCA2P51587 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.95□□□□□ -1.94
BRCA2P51587 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.95□□□□□ -1.94
BRCA2P51587 AC108860.1-201ENST00000484521 383 ntBASIC2.95□□□□□ -1.94
BRCA2P51587 AL110115.1-201ENST00000614396 364 ntBASIC2.95□□□□□ -1.94
BRCA2P51587 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.95□□□□□ -1.94
BRCA2P51587 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.95□□□□□ -1.94
BRCA2P51587 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
BRCA2P51587 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
BRCA2P51587 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
BRCA2P51587 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
BRCA2P51587 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
BRCA2P51587 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
BRCA2P51587 AC004014.2-201ENST00000623718 5122 ntBASIC2.95□□□□□ -1.94
BRCA2P51587 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
BRCA2P51587 AC096638.1-201ENST00000444678 216 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms