Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.38□□□□□ -1.71
RXRGP48443 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.38□□□□□ -1.71
RXRGP48443 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.38□□□□□ -1.71
RXRGP48443 GLRXP1-201ENST00000423261 334 ntBASIC4.38□□□□□ -1.71
RXRGP48443 AL049610.1-201ENST00000423374 372 ntBASIC4.38□□□□□ -1.71
RXRGP48443 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.38□□□□□ -1.71
RXRGP48443 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.38□□□□□ -1.71
RXRGP48443 RPS3AP54-201ENST00000435535 734 ntBASIC4.38□□□□□ -1.71
RXRGP48443 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.38□□□□□ -1.71
RXRGP48443 AL451050.1-201ENST00000450126 415 ntBASIC4.38□□□□□ -1.71
RXRGP48443 MTCO3P11-201ENST00000455103 774 ntBASIC4.38□□□□□ -1.71
RXRGP48443 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.38□□□□□ -1.71
RXRGP48443 UBTFL6-201ENST00000477929 1024 ntBASIC4.38□□□□□ -1.71
RXRGP48443 AC041039.1-201ENST00000485656 536 ntBASIC4.38□□□□□ -1.71
RXRGP48443 FAM172BP-201ENST00000487497 1089 ntBASIC4.38□□□□□ -1.71
RXRGP48443 AC134050.1-201ENST00000495088 933 ntBASIC4.38□□□□□ -1.71
RXRGP48443 HMGB1P28-201ENST00000507778 552 ntBASIC4.38□□□□□ -1.71
RXRGP48443 RNU6-1073P-201ENST00000517182 106 ntBASIC4.38□□□□□ -1.71
RXRGP48443 IGHV3-32-201ENST00000519182 355 ntBASIC4.38□□□□□ -1.71
RXRGP48443 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.38□□□□□ -1.71
RXRGP48443 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.38□□□□□ -1.71
RXRGP48443 AC100770.1-201ENST00000532310 322 ntBASIC4.38□□□□□ -1.71
RXRGP48443 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.38□□□□□ -1.71
RXRGP48443 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.38□□□□□ -1.71
RXRGP48443 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RXRGP48443 EEF1B2P4-201ENST00000551398 348 ntBASIC4.38□□□□□ -1.71
RXRGP48443 CBX3P5-201ENST00000552017 521 ntBASIC4.38□□□□□ -1.71
RXRGP48443 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.38□□□□□ -1.71
RXRGP48443 AC090695.1-201ENST00000561269 1222 ntBASIC4.38□□□□□ -1.71
RXRGP48443 AL049838.1-201ENST00000563647 981 ntBASIC4.38□□□□□ -1.71
RXRGP48443 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.38□□□□□ -1.71
RXRGP48443 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.38□□□□□ -1.71
RXRGP48443 BPIFA4P-203ENST00000603168 689 ntBASIC4.38□□□□□ -1.71
RXRGP48443 BNIP3P11-201ENST00000603878 563 ntBASIC4.38□□□□□ -1.71
RXRGP48443 AC010738.1-201ENST00000604970 987 ntBASIC4.38□□□□□ -1.71
RXRGP48443 AC106052.1-201ENST00000608029 497 ntBASIC4.38□□□□□ -1.71
RXRGP48443 uc_338.32-201ENST00000615087 172 ntBASIC4.38□□□□□ -1.71
RXRGP48443 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.38□□□□□ -1.71
RXRGP48443 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.38□□□□□ -1.71
RXRGP48443 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RXRGP48443 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RXRGP48443 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RXRGP48443 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RXRGP48443 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RXRGP48443 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RXRGP48443 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RXRGP48443 USP8P1-201ENST00000494673 3183 ntBASIC4.37□□□□□ -1.71
RXRGP48443 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RXRGP48443 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RXRGP48443 RNU1-64P-201ENST00000365443 163 ntBASIC4.37□□□□□ -1.71
RXRGP48443 SNORA37-201ENST00000384504 129 ntBASIC4.37□□□□□ -1.71
RXRGP48443 MIR513A2-201ENST00000385249 127 ntBASIC4.37□□□□□ -1.71
RXRGP48443 ANAPC10P1-201ENST00000395991 556 ntBASIC4.37□□□□□ -1.71
RXRGP48443 ERHP2-201ENST00000402323 299 ntBASIC4.37□□□□□ -1.71
RXRGP48443 RNA5SP104-201ENST00000410989 118 ntBASIC4.37□□□□□ -1.71
RXRGP48443 RNU2-71P-201ENST00000411395 189 ntBASIC4.37□□□□□ -1.71
RXRGP48443 CRYBB2P1-203ENST00000415709 538 ntBASIC4.37□□□□□ -1.71
RXRGP48443 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RXRGP48443 RRM2P4-201ENST00000441721 562 ntBASIC4.37□□□□□ -1.71
RXRGP48443 CDC27P1-201ENST00000445384 715 ntBASIC4.37□□□□□ -1.71
RXRGP48443 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.37□□□□□ -1.71
RXRGP48443 AC012671.1-201ENST00000451912 203 ntBASIC4.37□□□□□ -1.71
RXRGP48443 snoU109.4-201ENST00000458953 143 ntBASIC4.37□□□□□ -1.71
RXRGP48443 AC026410.2-201ENST00000460281 156 ntBASIC4.37□□□□□ -1.71
RXRGP48443 RPS15AP17-201ENST00000470598 390 ntBASIC4.37□□□□□ -1.71
RXRGP48443 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.37□□□□□ -1.71
RXRGP48443 TRAV31-201ENST00000502780 342 ntBASIC4.37□□□□□ -1.71
RXRGP48443 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.37□□□□□ -1.71
RXRGP48443 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.37□□□□□ -1.71
RXRGP48443 RN7SKP31-201ENST00000516354 278 ntBASIC4.37□□□□□ -1.71
RXRGP48443 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.37□□□□□ -1.71
RXRGP48443 MED28P5-201ENST00000528254 438 ntBASIC4.37□□□□□ -1.71
RXRGP48443 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.37□□□□□ -1.71
RXRGP48443 AL121834.1-201ENST00000572284 509 ntBASIC4.37□□□□□ -1.71
RXRGP48443 MIR5186-201ENST00000577504 120 ntBASIC4.37□□□□□ -1.71
RXRGP48443 OR4K7P-201ENST00000580232 945 ntBASIC4.37□□□□□ -1.71
RXRGP48443 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.37□□□□□ -1.71
RXRGP48443 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.37□□□□□ -1.71
RXRGP48443 AC079587.1-201ENST00000603846 277 ntBASIC4.37□□□□□ -1.71
RXRGP48443 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.37□□□□□ -1.71
RXRGP48443 AL451074.6-201ENST00000608512 729 ntBASIC4.37□□□□□ -1.71
RXRGP48443 AL590282.1-201ENST00000610379 1136 ntBASIC4.37□□□□□ -1.71
RXRGP48443 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.37□□□□□ -1.71
RXRGP48443 MIR6891-201ENST00000618788 93 ntBASIC4.37□□□□□ -1.71
RXRGP48443 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.37□□□□□ -1.71
RXRGP48443 MIR4278-201ENST00000636094 69 ntBASIC4.37□□□□□ -1.71
RXRGP48443 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RXRGP48443 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
RXRGP48443 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RXRGP48443 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
RXRGP48443 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
RXRGP48443 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RXRGP48443 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
RXRGP48443 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RXRGP48443 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.36□□□□□ -1.71
RXRGP48443 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
RXRGP48443 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RXRGP48443 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RXRGP48443 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
RXRGP48443 SNORD74.4-201ENST00000364129 80 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms