Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC026368.1-201ENST00000614934 690 ntBASIC4.14□□□□□ -1.75
SOX2P48431 LINC00901.1-201ENST00000617252 152 ntBASIC4.14□□□□□ -1.75
SOX2P48431 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.14□□□□□ -1.75
SOX2P48431 AL160394.1-201ENST00000624765 724 ntBASIC4.14□□□□□ -1.75
SOX2P48431 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.14□□□□□ -1.75
SOX2P48431 CYP3A51P-201ENST00000633513 256 ntBASIC4.14□□□□□ -1.75
SOX2P48431 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SOX2P48431 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SOX2P48431 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.14□□□□□ -1.75
SOX2P48431 OR14L1P-202ENST00000641545 3009 ntBASIC4.14□□□□□ -1.75
SOX2P48431 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.14□□□□□ -1.75
SOX2P48431 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SOX2P48431 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SOX2P48431 AP001273.1-201ENST00000624493 3152 ntBASIC4.14□□□□□ -1.75
SOX2P48431 THAP12P4-201ENST00000528321 2266 ntBASIC4.14□□□□□ -1.75
SOX2P48431 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SOX2P48431 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SOX2P48431 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SOX2P48431 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
SOX2P48431 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SOX2P48431 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SOX2P48431 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SOX2P48431 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SOX2P48431 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
SOX2P48431 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.13□□□□□ -1.75
SOX2P48431 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SOX2P48431 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SOX2P48431 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SOX2P48431 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SOX2P48431 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.13□□□□□ -1.75
SOX2P48431 RNU5A-6P-201ENST00000384136 116 ntBASIC4.13□□□□□ -1.75
SOX2P48431 RNU6-533P-201ENST00000384144 107 ntBASIC4.13□□□□□ -1.75
SOX2P48431 RNU6-769P-201ENST00000384407 104 ntBASIC4.13□□□□□ -1.75
SOX2P48431 RNU6-809P-201ENST00000384461 107 ntBASIC4.13□□□□□ -1.75
SOX2P48431 MIR143-201ENST00000385300 106 ntBASIC4.13□□□□□ -1.75
SOX2P48431 U3.36-201ENST00000408418 213 ntBASIC4.13□□□□□ -1.75
SOX2P48431 AC009237.10-201ENST00000414112 510 ntBASIC4.13□□□□□ -1.75
SOX2P48431 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.13□□□□□ -1.75
SOX2P48431 AL513174.1-201ENST00000423182 629 ntBASIC4.13□□□□□ -1.75
SOX2P48431 Z74021.1-201ENST00000423610 407 ntBASIC4.13□□□□□ -1.75
SOX2P48431 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.13□□□□□ -1.75
SOX2P48431 NPM1P34-201ENST00000428821 893 ntBASIC4.13□□□□□ -1.75
SOX2P48431 AL121776.1-201ENST00000429337 372 ntBASIC4.13□□□□□ -1.75
SOX2P48431 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.13□□□□□ -1.75
SOX2P48431 RPL12P46-201ENST00000436610 195 ntBASIC4.13□□□□□ -1.75
SOX2P48431 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SOX2P48431 AC244505.5-201ENST00000443639 207 ntBASIC4.13□□□□□ -1.75
SOX2P48431 GEMIN8P3-201ENST00000445417 720 ntBASIC4.13□□□□□ -1.75
SOX2P48431 AL590365.1-201ENST00000450788 243 ntBASIC4.13□□□□□ -1.75
SOX2P48431 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.13□□□□□ -1.75
SOX2P48431 USP9YP34-201ENST00000453983 808 ntBASIC4.13□□□□□ -1.75
SOX2P48431 BX322784.1-201ENST00000455793 1077 ntBASIC4.13□□□□□ -1.75
SOX2P48431 KLF3P2-201ENST00000465138 268 ntBASIC4.13□□□□□ -1.75
SOX2P48431 AC072052.1-201ENST00000496556 306 ntBASIC4.13□□□□□ -1.75
SOX2P48431 AC104109.1-201ENST00000498563 436 ntBASIC4.13□□□□□ -1.75
SOX2P48431 RNF138P1-201ENST00000502765 546 ntBASIC4.13□□□□□ -1.75
SOX2P48431 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.13□□□□□ -1.75
SOX2P48431 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SOX2P48431 KCTD9P2-201ENST00000512203 1013 ntBASIC4.13□□□□□ -1.75
SOX2P48431 AC034159.1-201ENST00000513885 583 ntBASIC4.13□□□□□ -1.75
SOX2P48431 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.13□□□□□ -1.75
SOX2P48431 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.13□□□□□ -1.75
SOX2P48431 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.13□□□□□ -1.75
SOX2P48431 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.13□□□□□ -1.75
SOX2P48431 AC022878.1-201ENST00000530684 149 ntBASIC4.13□□□□□ -1.75
SOX2P48431 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.13□□□□□ -1.75
SOX2P48431 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SOX2P48431 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.13□□□□□ -1.75
SOX2P48431 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.13□□□□□ -1.75
SOX2P48431 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.13□□□□□ -1.75
SOX2P48431 AC015912.2-201ENST00000571053 181 ntBASIC4.13□□□□□ -1.75
SOX2P48431 MIR4716-201ENST00000579628 84 ntBASIC4.13□□□□□ -1.75
SOX2P48431 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.13□□□□□ -1.75
SOX2P48431 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.13□□□□□ -1.75
SOX2P48431 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.13□□□□□ -1.75
SOX2P48431 IMMP1LP3-201ENST00000604197 224 ntBASIC4.13□□□□□ -1.75
SOX2P48431 AC112191.3-201ENST00000604371 277 ntBASIC4.13□□□□□ -1.75
SOX2P48431 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SOX2P48431 AC008250.2-201ENST00000615261 205 ntBASIC4.13□□□□□ -1.75
SOX2P48431 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.13□□□□□ -1.75
SOX2P48431 AC140113.4-201ENST00000622087 222 ntBASIC4.13□□□□□ -1.75
SOX2P48431 AC000123.2-201ENST00000623124 461 ntBASIC4.13□□□□□ -1.75
SOX2P48431 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SOX2P48431 AL592148.3-201ENST00000608771 2646 ntBASIC4.13□□□□□ -1.75
SOX2P48431 AL122126.1-201ENST00000546905 1318 ntBASIC4.13□□□□□ -1.75
SOX2P48431 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SOX2P48431 MAPK10-286ENST00000641208 8747 ntBASIC4.13□□□□□ -1.75
SOX2P48431 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SOX2P48431 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SOX2P48431 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SOX2P48431 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SOX2P48431 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SOX2P48431 AC005832.2-201ENST00000538921 1430 ntBASIC4.12□□□□□ -1.75
SOX2P48431 AC093536.2-201ENST00000565257 1406 ntBASIC4.12□□□□□ -1.75
SOX2P48431 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SOX2P48431 ERCC6-202ENST00000374127 1782 ntBASIC4.12□□□□□ -1.75
SOX2P48431 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.12□□□□□ -1.75
SOX2P48431 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.12□□□□□ -1.75
SOX2P48431 AC074029.4-201ENST00000624796 1859 ntBASIC4.12□□□□□ -1.75
SOX2P48431 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms