Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 SPTLC1P2-201ENST00000407089 121 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 MIR1284-201ENST00000408337 120 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 PIGPP2-201ENST00000411569 458 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.59□□□□□ -1.83
NKX2-1P43699 TPT1P2-201ENST00000413105 503 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.59□□□□□ -1.83
NKX2-1P43699 MTCYBP38-201ENST00000417160 1123 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.59□□□□□ -1.83
NKX2-1P43699 PTP4A1P5-201ENST00000420305 455 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 AC092647.1-201ENST00000420654 287 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 USP9YP26-201ENST00000421008 661 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 AC019178.2-201ENST00000423595 505 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 RPS12P10-201ENST00000427031 377 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.59□□□□□ -1.83
NKX2-1P43699 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NKX2-1P43699 AL356276.2-201ENST00000435919 558 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NKX2-1P43699 GSTA7P-201ENST00000438425 448 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.59□□□□□ -1.83
NKX2-1P43699 ISCA1P2-201ENST00000438679 421 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 KATNBL1P3-201ENST00000443475 909 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.59□□□□□ -1.83
NKX2-1P43699 OR1H1P-201ENST00000448731 937 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.59□□□□□ -1.83
NKX2-1P43699 snoU13.3-201ENST00000459441 104 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 RPS3AP43-201ENST00000479743 781 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 OR4G11P-201ENST00000492842 939 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 AC108078.3-201ENST00000502633 489 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NKX2-1P43699 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.59□□□□□ -1.83
NKX2-1P43699 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.59□□□□□ -1.83
NKX2-1P43699 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.59□□□□□ -1.83
NKX2-1P43699 AC007016.1-201ENST00000512110 244 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 AC026412.2-201ENST00000512270 1075 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.59□□□□□ -1.83
NKX2-1P43699 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.59□□□□□ -1.83
NKX2-1P43699 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.59□□□□□ -1.83
NKX2-1P43699 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.59□□□□□ -1.83
NKX2-1P43699 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NKX2-1P43699 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.59□□□□□ -1.83
NKX2-1P43699 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.59□□□□□ -1.83
NKX2-1P43699 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.59□□□□□ -1.83
NKX2-1P43699 AC084824.1-201ENST00000550917 1005 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.59□□□□□ -1.83
NKX2-1P43699 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.59□□□□□ -1.83
NKX2-1P43699 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
NKX2-1P43699 AC105129.1-201ENST00000560250 297 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.59□□□□□ -1.83
NKX2-1P43699 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NKX2-1P43699 AC090616.5-202ENST00000582111 297 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.59□□□□□ -1.83
NKX2-1P43699 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.59□□□□□ -1.83
NKX2-1P43699 AC010620.1-201ENST00000601088 1102 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 DUXAP11-201ENST00000603858 526 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 AC025588.3-201ENST00000604182 274 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 AC112230.1-201ENST00000604342 547 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 AC124312.4-201ENST00000605533 310 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.59□□□□□ -1.83
NKX2-1P43699 AC245297.2-201ENST00000610119 565 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.59□□□□□ -1.83
NKX2-1P43699 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NKX2-1P43699 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.59□□□□□ -1.83
NKX2-1P43699 AC068137.4-201ENST00000638485 296 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 ZNF137P-201ENST00000456718 1920 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NKX2-1P43699 AC011477.1-204ENST00000623416 1325 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 OR11H5P-202ENST00000641612 1325 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 PNPT1P2-201ENST00000456768 2050 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NKX2-1P43699 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.59□□□□□ -1.84
NKX2-1P43699 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NKX2-1P43699 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NKX2-1P43699 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NKX2-1P43699 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.59□□□□□ -1.84
NKX2-1P43699 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NKX2-1P43699 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NKX2-1P43699 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
NKX2-1P43699 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NKX2-1P43699 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.58□□□□□ -1.84
NKX2-1P43699 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.58□□□□□ -1.84
NKX2-1P43699 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NKX2-1P43699 RNU6-553P-201ENST00000364047 96 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 RNU6-374P-201ENST00000364146 108 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.58□□□□□ -1.84
NKX2-1P43699 RNU6-878P-201ENST00000384578 110 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 MIR105-2-201ENST00000385083 81 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 RNU6-837P-201ENST00000391056 108 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 SNRPEP2-201ENST00000397592 279 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
NKX2-1P43699 AL049697.2-201ENST00000403708 294 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 RPS20P14-201ENST00000412545 360 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.58□□□□□ -1.84
NKX2-1P43699 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.58□□□□□ -1.84
NKX2-1P43699 AL022400.1-201ENST00000423946 935 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.58□□□□□ -1.84
NKX2-1P43699 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.58□□□□□ -1.84
NKX2-1P43699 FTH1P6-201ENST00000430768 320 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 NRBF2P3-201ENST00000432731 865 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms