Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 AC104634.1-201ENST00000452720 462 ntBASIC5.81□□□□□ -1.48
GRIK1P39086 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.81□□□□□ -1.48
GRIK1P39086 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
GRIK1P39086 GAPDHP62-201ENST00000515313 990 ntBASIC5.81□□□□□ -1.48
GRIK1P39086 RNU6-388P-201ENST00000517012 105 ntBASIC5.81□□□□□ -1.48
GRIK1P39086 RNU6-389P-201ENST00000517048 105 ntBASIC5.81□□□□□ -1.48
GRIK1P39086 AC022634.1-201ENST00000520765 532 ntBASIC5.81□□□□□ -1.48
GRIK1P39086 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
GRIK1P39086 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.81□□□□□ -1.48
GRIK1P39086 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.81□□□□□ -1.48
GRIK1P39086 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.81□□□□□ -1.48
GRIK1P39086 AL163153.1-201ENST00000554223 283 ntBASIC5.81□□□□□ -1.48
GRIK1P39086 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.81□□□□□ -1.48
GRIK1P39086 MIR1269B-201ENST00000580405 75 ntBASIC5.81□□□□□ -1.48
GRIK1P39086 MIR4680-201ENST00000580906 66 ntBASIC5.81□□□□□ -1.48
GRIK1P39086 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
GRIK1P39086 AC025857.2-201ENST00000602711 238 ntBASIC5.81□□□□□ -1.48
GRIK1P39086 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.81□□□□□ -1.48
GRIK1P39086 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.81□□□□□ -1.48
GRIK1P39086 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.81□□□□□ -1.48
GRIK1P39086 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.81□□□□□ -1.48
GRIK1P39086 AC005618.4-201ENST00000625053 554 ntBASIC5.81□□□□□ -1.48
GRIK1P39086 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.81□□□□□ -1.48
GRIK1P39086 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.81□□□□□ -1.48
GRIK1P39086 ASNSP1-204ENST00000641977 1664 ntBASIC5.81□□□□□ -1.48
GRIK1P39086 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
GRIK1P39086 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
GRIK1P39086 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
GRIK1P39086 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
GRIK1P39086 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.81□□□□□ -1.48
GRIK1P39086 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
GRIK1P39086 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
GRIK1P39086 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
GRIK1P39086 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
GRIK1P39086 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
GRIK1P39086 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
GRIK1P39086 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.8□□□□□ -1.48
GRIK1P39086 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
GRIK1P39086 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.8□□□□□ -1.48
GRIK1P39086 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
GRIK1P39086 AC092447.10-201ENST00000620607 1652 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
GRIK1P39086 AL157777.2-201ENST00000258070 137 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
GRIK1P39086 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
GRIK1P39086 NACAP2-201ENST00000318548 624 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
GRIK1P39086 Y_RNA.197-201ENST00000364004 102 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.8□□□□□ -1.48
GRIK1P39086 RNU6-1297P-201ENST00000384415 104 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 RNY4P36-201ENST00000391116 96 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 RPSAP35-201ENST00000413753 818 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.8□□□□□ -1.48
GRIK1P39086 AL669831.1-202ENST00000428504 417 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.8□□□□□ -1.48
GRIK1P39086 OR51AB1P-201ENST00000429046 620 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 RPEP2-201ENST00000432149 701 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 RPS3AP52-201ENST00000435639 297 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 PRPF38AP2-201ENST00000438179 851 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.8□□□□□ -1.48
GRIK1P39086 CACYBPP2-201ENST00000453625 678 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.8□□□□□ -1.48
GRIK1P39086 AC011225.1-201ENST00000457751 369 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 RNU6-261P-201ENST00000459506 102 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 HMGN2P26-201ENST00000463169 339 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 VN1R17P-201ENST00000472048 1090 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 UBA52P7-201ENST00000486088 380 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 AC112204.1-201ENST00000502591 103 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
GRIK1P39086 SNORA40.12-201ENST00000516329 111 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 RNA5SP34-201ENST00000516887 130 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 SCARNA16.4-201ENST00000516956 187 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.8□□□□□ -1.48
GRIK1P39086 AC008562.1-201ENST00000521763 330 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.8□□□□□ -1.48
GRIK1P39086 AC122688.1-201ENST00000541494 223 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.8□□□□□ -1.48
GRIK1P39086 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.8□□□□□ -1.48
GRIK1P39086 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.8□□□□□ -1.48
GRIK1P39086 SNRPGP18-201ENST00000553000 214 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.8□□□□□ -1.48
GRIK1P39086 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
GRIK1P39086 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.8□□□□□ -1.48
GRIK1P39086 IMMP1LP3-201ENST00000604197 224 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 AL133338.2-201ENST00000604292 736 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 AP001330.4-201ENST00000604350 154 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 BCRP9-201ENST00000605312 388 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 AP004247.3-201ENST00000608682 624 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 FAM157A-202ENST00000615155 405 ntBASIC5.8□□□□□ -1.48
GRIK1P39086 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.8□□□□□ -1.48
GRIK1P39086 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
GRIK1P39086 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
GRIK1P39086 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
GRIK1P39086 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.8□□□□□ -1.48
GRIK1P39086 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
GRIK1P39086 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.8□□□□□ -1.48
GRIK1P39086 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
GRIK1P39086 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.79□□□□□ -1.48
GRIK1P39086 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.79□□□□□ -1.48
GRIK1P39086 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms