Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.37□□□□□ -1.71
TNFSF4P23510 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TNFSF4P23510 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TNFSF4P23510 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TNFSF4P23510 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TNFSF4P23510 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
TNFSF4P23510 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TNFSF4P23510 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
TNFSF4P23510 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TNFSF4P23510 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TNFSF4P23510 AC092125.1-201ENST00000562568 1995 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.36□□□□□ -1.71
TNFSF4P23510 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TNFSF4P23510 SALL4P2-201ENST00000423288 2910 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
TNFSF4P23510 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
TNFSF4P23510 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.36□□□□□ -1.71
TNFSF4P23510 RNA5SP305-201ENST00000362665 119 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 SNORA74A-201ENST00000364089 198 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 SNORA66-201ENST00000384792 133 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 MIR765-201ENST00000390226 114 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 SNORD115.1-201ENST00000391109 76 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 RNU11-4P-201ENST00000391149 133 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 SPTLC1P2-201ENST00000407089 121 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 RN7SKP114-201ENST00000410327 279 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 Y_RNA.598-201ENST00000410480 95 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 RN7SKP56-201ENST00000410513 331 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 RN7SKP235-201ENST00000410662 305 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 RPL23AP27-201ENST00000415161 451 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 EI24P4-201ENST00000423683 1078 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 COX6CP13-201ENST00000428703 226 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 VN1R108P-201ENST00000431580 830 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 MTND1P28-201ENST00000435623 950 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.36□□□□□ -1.71
TNFSF4P23510 RPL22P17-201ENST00000438729 315 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 AP000936.2-201ENST00000447151 681 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.36□□□□□ -1.71
TNFSF4P23510 AC073850.1-201ENST00000449243 255 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 AL590365.1-201ENST00000450788 243 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.36□□□□□ -1.71
TNFSF4P23510 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TNFSF4P23510 RAP1BP2-201ENST00000478270 544 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 AC083829.1-201ENST00000503756 657 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
TNFSF4P23510 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
TNFSF4P23510 AC023141.12-201ENST00000512399 199 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.36□□□□□ -1.71
TNFSF4P23510 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.36□□□□□ -1.71
TNFSF4P23510 MTCYBP41-201ENST00000528913 1123 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 BRD9P1-201ENST00000529855 560 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.36□□□□□ -1.71
TNFSF4P23510 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.36□□□□□ -1.71
TNFSF4P23510 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.36□□□□□ -1.71
TNFSF4P23510 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.36□□□□□ -1.71
TNFSF4P23510 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.36□□□□□ -1.71
TNFSF4P23510 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.36□□□□□ -1.71
TNFSF4P23510 AC009101.1-201ENST00000568135 242 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 MIR548AB-201ENST00000584917 84 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 AC006116.3-201ENST00000592968 361 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 AC119751.7-201ENST00000600494 245 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 XIAPP1-201ENST00000603162 600 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 AL359999.1-201ENST00000604513 294 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 LINC00901.1-201ENST00000617252 152 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 AL161637.1-201ENST00000622380 412 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 AP002799.1-201ENST00000623552 423 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 AC139792.2-201ENST00000624218 587 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.36□□□□□ -1.71
TNFSF4P23510 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.36□□□□□ -1.71
TNFSF4P23510 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TNFSF4P23510 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.36□□□□□ -1.71
TNFSF4P23510 AL157700.1-201ENST00000561973 1432 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TNFSF4P23510 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
TNFSF4P23510 MTCO1P9-201ENST00000505577 1534 ntBASIC4.36□□□□□ -1.71
TNFSF4P23510 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
TNFSF4P23510 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TNFSF4P23510 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.35□□□□□ -1.71
TNFSF4P23510 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TNFSF4P23510 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.35□□□□□ -1.71
TNFSF4P23510 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TNFSF4P23510 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.35□□□□□ -1.71
TNFSF4P23510 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.35□□□□□ -1.71
TNFSF4P23510 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TNFSF4P23510 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TNFSF4P23510 PNPT1P2-201ENST00000456768 2050 ntBASIC4.35□□□□□ -1.71
TNFSF4P23510 RN7SKP44-201ENST00000363602 316 ntBASIC4.35□□□□□ -1.71
TNFSF4P23510 U8.4-201ENST00000363626 134 ntBASIC4.35□□□□□ -1.71
TNFSF4P23510 SNORA7.2-201ENST00000364446 145 ntBASIC4.35□□□□□ -1.71
TNFSF4P23510 Y_RNA.318-201ENST00000365131 97 ntBASIC4.35□□□□□ -1.71
TNFSF4P23510 SNORA70-201ENST00000384436 135 ntBASIC4.35□□□□□ -1.71
TNFSF4P23510 SNORD3H-201ENST00000384486 214 ntBASIC4.35□□□□□ -1.71
TNFSF4P23510 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TNFSF4P23510 RPL21P67-201ENST00000402896 478 ntBASIC4.35□□□□□ -1.71
TNFSF4P23510 AL138880.1-201ENST00000405824 642 ntBASIC4.35□□□□□ -1.71
TNFSF4P23510 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.35□□□□□ -1.71
TNFSF4P23510 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TNFSF4P23510 AC093162.1-201ENST00000419682 124 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms