Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 NAMPTP2-201ENST00000505629 1115 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AC010460.1-201ENST00000507087 466 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AC092451.2-201ENST00000538746 658 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AC090877.1-201ENST00000561418 344 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AC009101.1-201ENST00000568135 242 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AL606490.9-201ENST00000603331 271 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 VN1R7P-201ENST00000619242 903 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AP000943.4-201ENST00000622912 357 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AP001148.1-201ENST00000624124 2359 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 RNU6-1249P-201ENST00000363237 111 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 RNU6-839P-201ENST00000363347 108 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 RNU6-213P-201ENST00000384051 104 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 ZNF602P-201ENST00000405929 924 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 RAD23BP2-201ENST00000416003 1207 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 RPL7P2-201ENST00000427639 268 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 USP12PY-201ENST00000427677 1064 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 RPL21P104-201ENST00000464143 478 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 GAPDHP39-201ENST00000481866 979 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 AC084024.2-201ENST00000503480 791 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 RNA5SP164-201ENST00000516533 110 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 RNU6-467P-201ENST00000517027 110 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 AC053481.4-201ENST00000583164 216 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 AC090330.1-201ENST00000588646 764 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 AC110741.2-201ENST00000605278 268 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 AP000238.1-201ENST00000608759 426 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 AC099676.1-201ENST00000608886 657 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 AL512506.2-201ENST00000624472 458 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 AC006927.2-201ENST00000639256 389 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 OTUD4P1-201ENST00000237841 3067 ntBASIC3.89□□□□□ -1.79
HLA-DPA1P20036 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
HLA-DPA1P20036 AC004925.1-201ENST00000624256 2706 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
HLA-DPA1P20036 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.88□□□□□ -1.79
HLA-DPA1P20036 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.88□□□□□ -1.79
HLA-DPA1P20036 RNU6-251P-201ENST00000363235 104 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DPA1P20036 MCTS2P-201ENST00000394552 546 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 AL133264.1-201ENST00000407157 562 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DPA1P20036 MTCYBP32-201ENST00000427945 1084 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 AL590103.1-201ENST00000434488 307 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.88□□□□□ -1.79
HLA-DPA1P20036 AC098824.1-201ENST00000453565 980 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 HMGB1P15-201ENST00000453854 435 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HLA-DPA1P20036 MTCO3P35-201ENST00000485582 781 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 AL024509.2-201ENST00000493462 493 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.88□□□□□ -1.79
HLA-DPA1P20036 AC010342.1-201ENST00000514047 877 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 MTCO2P32-201ENST00000514865 403 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 IGKV2D-19-201ENST00000523346 262 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.88□□□□□ -1.79
HLA-DPA1P20036 MTND5P21-201ENST00000531961 522 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DPA1P20036 AL121603.1-201ENST00000553815 142 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.88□□□□□ -1.79
HLA-DPA1P20036 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DPA1P20036 AC022916.3-201ENST00000592961 742 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 AC015726.1-201ENST00000602353 681 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 AP003973.1-201ENST00000604639 691 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms