Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HMGA1P17096 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.9□□□□□ -1.95
HMGA1P17096 AL133412.1-201ENST00000380194 2992 ntBASIC2.9□□□□□ -1.95
HMGA1P17096 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HMGA1P17096 AL136360.1-201ENST00000503377 1900 ntBASIC2.89□□□□□ -1.95
HMGA1P17096 AL353743.4-201ENST00000422653 1547 ntBASIC2.89□□□□□ -1.95
HMGA1P17096 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.89□□□□□ -1.95
HMGA1P17096 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC2.89□□□□□ -1.95
HMGA1P17096 SNORA48.8-201ENST00000391324 134 ntBASIC2.89□□□□□ -1.95
HMGA1P17096 RNA5SP80-201ENST00000410475 111 ntBASIC2.89□□□□□ -1.95
HMGA1P17096 MTCO1P51-201ENST00000427672 1060 ntBASIC2.89□□□□□ -1.95
HMGA1P17096 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.89□□□□□ -1.95
HMGA1P17096 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.89□□□□□ -1.95
HMGA1P17096 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.89□□□□□ -1.95
HMGA1P17096 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC2.89□□□□□ -1.95
HMGA1P17096 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.89□□□□□ -1.95
HMGA1P17096 RPL31P13-201ENST00000484151 370 ntBASIC2.89□□□□□ -1.95
HMGA1P17096 USP9YP5-201ENST00000511770 630 ntBASIC2.89□□□□□ -1.95
HMGA1P17096 AC118465.1-201ENST00000513820 1271 ntBASIC2.89□□□□□ -1.95
HMGA1P17096 MTHFD2P4-201ENST00000515074 1025 ntBASIC2.89□□□□□ -1.95
HMGA1P17096 RNA5SP380-201ENST00000517190 98 ntBASIC2.89□□□□□ -1.95
HMGA1P17096 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.89□□□□□ -1.95
HMGA1P17096 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.89□□□□□ -1.95
HMGA1P17096 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC2.89□□□□□ -1.95
HMGA1P17096 AC007954.1-201ENST00000554198 494 ntBASIC2.89□□□□□ -1.95
HMGA1P17096 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC2.89□□□□□ -1.95
HMGA1P17096 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.89□□□□□ -1.95
HMGA1P17096 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC2.89□□□□□ -1.95
HMGA1P17096 AC005858.4-201ENST00000623191 700 ntBASIC2.89□□□□□ -1.95
HMGA1P17096 AC093831.2-201ENST00000624393 3427 ntBASIC2.89□□□□□ -1.95
HMGA1P17096 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HMGA1P17096 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC2.89□□□□□ -1.95
HMGA1P17096 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
HMGA1P17096 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.89□□□□□ -1.95
HMGA1P17096 AL079305.1-201ENST00000623159 3008 ntBASIC2.89□□□□□ -1.95
HMGA1P17096 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
HMGA1P17096 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
HMGA1P17096 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HMGA1P17096 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.88□□□□□ -1.95
HMGA1P17096 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.88□□□□□ -1.95
HMGA1P17096 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HMGA1P17096 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HMGA1P17096 RAD1P1-201ENST00000231383 813 ntBASIC2.88□□□□□ -1.95
HMGA1P17096 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HMGA1P17096 MIR34A-201ENST00000385130 110 ntBASIC2.88□□□□□ -1.95
HMGA1P17096 RPS4XP8-201ENST00000402039 771 ntBASIC2.88□□□□□ -1.95
HMGA1P17096 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGA1P17096 MRPL50P2-201ENST00000416821 482 ntBASIC2.88□□□□□ -1.95
HMGA1P17096 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.88□□□□□ -1.95
HMGA1P17096 AL513043.1-201ENST00000439124 535 ntBASIC2.88□□□□□ -1.95
HMGA1P17096 AP000936.2-201ENST00000447151 681 ntBASIC2.88□□□□□ -1.95
HMGA1P17096 NPM1P13-201ENST00000452663 865 ntBASIC2.88□□□□□ -1.95
HMGA1P17096 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC2.88□□□□□ -1.95
HMGA1P17096 AC003982.1-202ENST00000469928 248 ntBASIC2.88□□□□□ -1.95
HMGA1P17096 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.88□□□□□ -1.95
HMGA1P17096 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.88□□□□□ -1.95
HMGA1P17096 NPM1P35-201ENST00000533043 868 ntBASIC2.88□□□□□ -1.95
HMGA1P17096 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC2.88□□□□□ -1.95
HMGA1P17096 AC027807.1-201ENST00000559921 996 ntBASIC2.88□□□□□ -1.95
HMGA1P17096 AC103881.1-201ENST00000603476 538 ntBASIC2.88□□□□□ -1.95
HMGA1P17096 AL359535.1-201ENST00000612100 1087 ntBASIC2.88□□□□□ -1.95
HMGA1P17096 AC010338.1-201ENST00000621823 717 ntBASIC2.88□□□□□ -1.95
HMGA1P17096 AC006111.3-201ENST00000622137 383 ntBASIC2.88□□□□□ -1.95
HMGA1P17096 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.88□□□□□ -1.95
HMGA1P17096 AC095050.2-201ENST00000510748 1458 ntBASIC2.88□□□□□ -1.95
HMGA1P17096 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HMGA1P17096 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HMGA1P17096 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HMGA1P17096 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HMGA1P17096 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HMGA1P17096 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
HMGA1P17096 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HMGA1P17096 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.87□□□□□ -1.95
HMGA1P17096 MIR1183-201ENST00000408856 89 ntBASIC2.87□□□□□ -1.95
HMGA1P17096 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.87□□□□□ -1.95
HMGA1P17096 AC004987.3-201ENST00000413879 771 ntBASIC2.87□□□□□ -1.95
HMGA1P17096 AC073069.1-201ENST00000428657 441 ntBASIC2.87□□□□□ -1.95
HMGA1P17096 RPS29P6-201ENST00000438196 145 ntBASIC2.87□□□□□ -1.95
HMGA1P17096 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.87□□□□□ -1.95
HMGA1P17096 AC090525.1-201ENST00000479116 478 ntBASIC2.87□□□□□ -1.95
HMGA1P17096 RPL23AP44-201ENST00000482216 473 ntBASIC2.87□□□□□ -1.95
HMGA1P17096 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.87□□□□□ -1.95
HMGA1P17096 AC078817.1-201ENST00000492623 435 ntBASIC2.87□□□□□ -1.95
HMGA1P17096 AC006445.2-201ENST00000510061 472 ntBASIC2.87□□□□□ -1.95
HMGA1P17096 RNU4-29P-201ENST00000515943 174 ntBASIC2.87□□□□□ -1.95
HMGA1P17096 RPL12P22-201ENST00000519073 490 ntBASIC2.87□□□□□ -1.95
HMGA1P17096 AC103783.1-201ENST00000520506 373 ntBASIC2.87□□□□□ -1.95
HMGA1P17096 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.87□□□□□ -1.95
HMGA1P17096 RFPL1S-203ENST00000539579 330 ntBASIC2.87□□□□□ -1.95
HMGA1P17096 CBX3P5-201ENST00000552017 521 ntBASIC2.87□□□□□ -1.95
HMGA1P17096 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.87□□□□□ -1.95
HMGA1P17096 AC055876.1-202ENST00000567053 138 ntBASIC2.87□□□□□ -1.95
HMGA1P17096 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC2.87□□□□□ -1.95
HMGA1P17096 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.87□□□□□ -1.95
HMGA1P17096 Z99129.2-201ENST00000619967 314 ntBASIC2.87□□□□□ -1.95
HMGA1P17096 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
HMGA1P17096 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.86□□□□□ -1.95
HMGA1P17096 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.86□□□□□ -1.95
HMGA1P17096 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
HMGA1P17096 RNU6-859P-201ENST00000362728 107 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms