Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.72□□□□□ -1.17
CD44P16070 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CD44P16070 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
CD44P16070 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CD44P16070 AL589993.1-201ENST00000407450 2524 ntBASIC7.72□□□□□ -1.17
CD44P16070 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
CD44P16070 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.71□□□□□ -1.17
CD44P16070 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
CD44P16070 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.71□□□□□ -1.17
CD44P16070 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.71□□□□□ -1.17
CD44P16070 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.18
CD44P16070 RPL9P7-201ENST00000330965 580 ntBASIC7.71□□□□□ -1.18
CD44P16070 SNORA30B-201ENST00000365319 129 ntBASIC7.71□□□□□ -1.18
CD44P16070 RNA5SP427-201ENST00000365323 119 ntBASIC7.71□□□□□ -1.18
CD44P16070 SNORA70.5-201ENST00000365519 135 ntBASIC7.71□□□□□ -1.18
CD44P16070 RPSAP1-201ENST00000421328 880 ntBASIC7.71□□□□□ -1.18
CD44P16070 AL357632.1-201ENST00000426688 643 ntBASIC7.71□□□□□ -1.18
CD44P16070 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC7.71□□□□□ -1.18
CD44P16070 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.71□□□□□ -1.18
CD44P16070 AC009237.7-201ENST00000447357 229 ntBASIC7.71□□□□□ -1.18
CD44P16070 MRPS10P1-201ENST00000448483 130 ntBASIC7.71□□□□□ -1.18
CD44P16070 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.71□□□□□ -1.18
CD44P16070 AC083806.1-201ENST00000468934 316 ntBASIC7.71□□□□□ -1.18
CD44P16070 RPL21P126-201ENST00000470049 478 ntBASIC7.71□□□□□ -1.18
CD44P16070 RPS26P21-201ENST00000475397 348 ntBASIC7.71□□□□□ -1.18
CD44P16070 AC135721.1-201ENST00000497954 479 ntBASIC7.71□□□□□ -1.18
CD44P16070 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC7.71□□□□□ -1.18
CD44P16070 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC7.71□□□□□ -1.18
CD44P16070 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC7.71□□□□□ -1.18
CD44P16070 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.71□□□□□ -1.18
CD44P16070 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.71□□□□□ -1.18
CD44P16070 AC061975.3-201ENST00000583209 244 ntBASIC7.71□□□□□ -1.18
CD44P16070 MIR3187-201ENST00000583431 70 ntBASIC7.71□□□□□ -1.18
CD44P16070 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC7.71□□□□□ -1.18
CD44P16070 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC7.71□□□□□ -1.18
CD44P16070 BX005040.2-201ENST00000620504 370 ntBASIC7.71□□□□□ -1.18
CD44P16070 AL031601.2-202ENST00000622650 282 ntBASIC7.71□□□□□ -1.18
CD44P16070 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC7.71□□□□□ -1.18
CD44P16070 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC7.71□□□□□ -1.18
CD44P16070 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.71□□□□□ -1.18
CD44P16070 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CD44P16070 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.71□□□□□ -1.18
CD44P16070 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
CD44P16070 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.18
CD44P16070 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CD44P16070 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
CD44P16070 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CD44P16070 AC129502.1-201ENST00000623261 1654 ntBASIC7.7□□□□□ -1.18
CD44P16070 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.7□□□□□ -1.18
CD44P16070 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.7□□□□□ -1.18
CD44P16070 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CD44P16070 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.7□□□□□ -1.18
CD44P16070 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CD44P16070 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CD44P16070 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
CD44P16070 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.7□□□□□ -1.18
CD44P16070 RN7SKP128-201ENST00000364270 303 ntBASIC7.7□□□□□ -1.18
CD44P16070 RNU6-76P-201ENST00000384060 104 ntBASIC7.7□□□□□ -1.18
CD44P16070 RNU6-926P-201ENST00000384075 107 ntBASIC7.7□□□□□ -1.18
CD44P16070 RNU6-376P-201ENST00000384731 106 ntBASIC7.7□□□□□ -1.18
CD44P16070 RPSAP44-201ENST00000406712 884 ntBASIC7.7□□□□□ -1.18
CD44P16070 RPL7L1P9-201ENST00000431298 745 ntBASIC7.7□□□□□ -1.18
CD44P16070 AC004938.1-201ENST00000438468 308 ntBASIC7.7□□□□□ -1.18
CD44P16070 AL513043.1-201ENST00000439124 535 ntBASIC7.7□□□□□ -1.18
CD44P16070 AC010683.1-201ENST00000473673 378 ntBASIC7.7□□□□□ -1.18
CD44P16070 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
CD44P16070 Y_RNA.706-201ENST00000516933 99 ntBASIC7.7□□□□□ -1.18
CD44P16070 AC022616.8-201ENST00000533569 253 ntBASIC7.7□□□□□ -1.18
CD44P16070 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC7.7□□□□□ -1.18
CD44P16070 AC007998.5-201ENST00000622938 237 ntBASIC7.7□□□□□ -1.18
CD44P16070 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CD44P16070 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC7.7□□□□□ -1.18
CD44P16070 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC7.7□□□□□ -1.18
CD44P16070 AC007342.5-201ENST00000571340 2142 ntBASIC7.7□□□□□ -1.18
CD44P16070 ST7-212ENST00000422922 1887 ntTSL 5 BASIC7.7□□□□□ -1.18
CD44P16070 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CD44P16070 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.7□□□□□ -1.18
CD44P16070 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
CD44P16070 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CD44P16070 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.69□□□□□ -1.18
CD44P16070 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.69□□□□□ -1.18
CD44P16070 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CD44P16070 AC007406.5-201ENST00000570140 3170 ntBASIC7.69□□□□□ -1.18
CD44P16070 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC7.69□□□□□ -1.18
CD44P16070 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.69□□□□□ -1.18
CD44P16070 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CD44P16070 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CD44P16070 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.69□□□□□ -1.18
CD44P16070 AC093278.2-201ENST00000564956 2485 ntBASIC7.69□□□□□ -1.18
CD44P16070 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
CD44P16070 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CD44P16070 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.69□□□□□ -1.18
CD44P16070 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CD44P16070 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
CD44P16070 RNU6-227P-201ENST00000362865 103 ntBASIC7.69□□□□□ -1.18
CD44P16070 RNU4-17P-201ENST00000365598 141 ntBASIC7.69□□□□□ -1.18
CD44P16070 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.69□□□□□ -1.18
CD44P16070 RN7SKP148-201ENST00000410179 275 ntBASIC7.69□□□□□ -1.18
CD44P16070 AC092809.3-201ENST00000415453 231 ntBASIC7.69□□□□□ -1.18
CD44P16070 AL160275.3-201ENST00000423876 471 ntBASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms