Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.98□□□□□ -1.93
CD74P04233 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.98□□□□□ -1.93
CD74P04233 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC2.98□□□□□ -1.93
CD74P04233 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.98□□□□□ -1.93
CD74P04233 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.98□□□□□ -1.93
CD74P04233 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.98□□□□□ -1.93
CD74P04233 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.98□□□□□ -1.93
CD74P04233 SNRPGP15-201ENST00000600149 222 ntBASIC2.98□□□□□ -1.93
CD74P04233 ZNF92P2-201ENST00000600543 1059 ntBASIC2.98□□□□□ -1.93
CD74P04233 AL109618.2-201ENST00000605527 211 ntBASIC2.98□□□□□ -1.93
CD74P04233 AL359535.1-201ENST00000612100 1087 ntBASIC2.98□□□□□ -1.93
CD74P04233 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CD74P04233 AC004972.1-201ENST00000623934 2209 ntBASIC2.98□□□□□ -1.93
CD74P04233 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CD74P04233 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.98□□□□□ -1.93
CD74P04233 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.98□□□□□ -1.93
CD74P04233 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.98□□□□□ -1.93
CD74P04233 HSPA8P19-201ENST00000505359 1517 ntBASIC2.98□□□□□ -1.93
CD74P04233 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.97□□□□□ -1.93
CD74P04233 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CD74P04233 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.97□□□□□ -1.93
CD74P04233 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.97□□□□□ -1.93
CD74P04233 RNU6-335P-201ENST00000364563 113 ntBASIC2.97□□□□□ -1.93
CD74P04233 RNU1-64P-201ENST00000365443 163 ntBASIC2.97□□□□□ -1.93
CD74P04233 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CD74P04233 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.97□□□□□ -1.93
CD74P04233 HMGB3P23-201ENST00000414981 585 ntBASIC2.97□□□□□ -1.93
CD74P04233 MTCYBP24-201ENST00000420387 1106 ntBASIC2.97□□□□□ -1.93
CD74P04233 OR51AB1P-201ENST00000429046 620 ntBASIC2.97□□□□□ -1.93
CD74P04233 AC005189.1-201ENST00000431286 310 ntBASIC2.97□□□□□ -1.93
CD74P04233 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CD74P04233 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.97□□□□□ -1.93
CD74P04233 RNFT1P2-201ENST00000443064 757 ntBASIC2.97□□□□□ -1.93
CD74P04233 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.97□□□□□ -1.93
CD74P04233 Z77249.1-201ENST00000444622 1175 ntBASIC2.97□□□□□ -1.93
CD74P04233 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.97□□□□□ -1.93
CD74P04233 HMGB1P48-201ENST00000446155 598 ntBASIC2.97□□□□□ -1.93
CD74P04233 AC092685.1-201ENST00000447960 1243 ntBASIC2.97□□□□□ -1.93
CD74P04233 AL353718.1-201ENST00000451028 517 ntBASIC2.97□□□□□ -1.93
CD74P04233 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.97□□□□□ -1.93
CD74P04233 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.97□□□□□ -1.93
CD74P04233 AC026402.1-201ENST00000513642 170 ntBASIC2.97□□□□□ -1.93
CD74P04233 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.97□□□□□ -1.93
CD74P04233 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.97□□□□□ -1.93
CD74P04233 AC107934.2-201ENST00000518653 310 ntBASIC2.97□□□□□ -1.93
CD74P04233 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC2.97□□□□□ -1.93
CD74P04233 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.97□□□□□ -1.93
CD74P04233 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.97□□□□□ -1.93
CD74P04233 OR8R1P-201ENST00000543943 764 ntBASIC2.97□□□□□ -1.93
CD74P04233 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.97□□□□□ -1.93
CD74P04233 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.97□□□□□ -1.93
CD74P04233 AC090751.1-201ENST00000566966 267 ntBASIC2.97□□□□□ -1.93
CD74P04233 AC012182.1-201ENST00000570133 895 ntBASIC2.97□□□□□ -1.93
CD74P04233 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC2.97□□□□□ -1.93
CD74P04233 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.97□□□□□ -1.93
CD74P04233 AL671309.1-201ENST00000603750 544 ntBASIC2.97□□□□□ -1.93
CD74P04233 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC2.97□□□□□ -1.93
CD74P04233 AC011374.2-201ENST00000607135 526 ntBASIC2.97□□□□□ -1.93
CD74P04233 AP001033.2-201ENST00000609701 1003 ntBASIC2.97□□□□□ -1.93
CD74P04233 MIR6867-201ENST00000610636 67 ntBASIC2.97□□□□□ -1.93
CD74P04233 AL445493.3-201ENST00000619568 477 ntBASIC2.97□□□□□ -1.93
CD74P04233 MIR6500-201ENST00000622700 86 ntBASIC2.97□□□□□ -1.93
CD74P04233 AC020923.1-201ENST00000624021 917 ntBASIC2.97□□□□□ -1.93
CD74P04233 AC073476.4-201ENST00000628409 72 ntBASIC2.97□□□□□ -1.93
CD74P04233 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CD74P04233 AC093908.1-201ENST00000623125 8092 ntBASIC2.97□□□□□ -1.93
CD74P04233 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CD74P04233 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CD74P04233 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CD74P04233 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.97□□□□□ -1.93
CD74P04233 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CD74P04233 AC118273.1-201ENST00000525324 3006 ntBASIC2.97□□□□□ -1.93
CD74P04233 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CD74P04233 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CD74P04233 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CD74P04233 MAPK10-362ENST00000641864 4484 ntBASIC2.97□□□□□ -1.93
CD74P04233 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.96□□□□□ -1.94
CD74P04233 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CD74P04233 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CD74P04233 SPRR2C-201ENST00000290702 219 ntBASIC2.96□□□□□ -1.94
CD74P04233 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.96□□□□□ -1.94
CD74P04233 MIR148B-201ENST00000362252 99 ntBASIC2.96□□□□□ -1.94
CD74P04233 SNORD56.3-201ENST00000363507 71 ntBASIC2.96□□□□□ -1.94
CD74P04233 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
CD74P04233 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CD74P04233 RN7SKP27-201ENST00000410684 333 ntBASIC2.96□□□□□ -1.94
CD74P04233 RN7SKP53-201ENST00000411337 315 ntBASIC2.96□□□□□ -1.94
CD74P04233 USP9YP19-201ENST00000412165 485 ntBASIC2.96□□□□□ -1.94
CD74P04233 AC245054.1-201ENST00000420944 258 ntBASIC2.96□□□□□ -1.94
CD74P04233 AL121882.1-201ENST00000422893 417 ntBASIC2.96□□□□□ -1.94
CD74P04233 PNRC2P1-201ENST00000423940 420 ntBASIC2.96□□□□□ -1.94
CD74P04233 MTATP6P11-201ENST00000428071 670 ntBASIC2.96□□□□□ -1.94
CD74P04233 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.96□□□□□ -1.94
CD74P04233 VDAC1P3-201ENST00000434069 851 ntBASIC2.96□□□□□ -1.94
CD74P04233 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.96□□□□□ -1.94
CD74P04233 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.96□□□□□ -1.94
CD74P04233 FTH1P1-201ENST00000437933 532 ntBASIC2.96□□□□□ -1.94
CD74P04233 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.96□□□□□ -1.94
CD74P04233 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.96□□□□□ -1.94
CD74P04233 HMGN2P16-201ENST00000456802 261 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms