Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.44□□□□□ -1.86
CLDN9O95484 AC103710.3-201ENST00000608157 948 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.44□□□□□ -1.86
CLDN9O95484 AC021851.1-201ENST00000608537 1082 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 AC097460.3-201ENST00000623099 442 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.44□□□□□ -1.86
CLDN9O95484 OR8B1P-202ENST00000641132 1178 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN9O95484 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CLDN9O95484 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN9O95484 MFSD8-236ENST00000641509 4050 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN9O95484 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
CLDN9O95484 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN9O95484 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN9O95484 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN9O95484 MIR670-201ENST00000390142 98 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 RNU6-328P-201ENST00000390887 106 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 AC007066.1-201ENST00000392902 381 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 ATP5F1P3-201ENST00000397213 657 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 AC069218.2-201ENST00000411665 344 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.43□□□□□ -1.86
CLDN9O95484 GOT2P5-201ENST00000433995 546 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN9O95484 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN9O95484 RPS26P56-201ENST00000444468 240 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN9O95484 HMGN2P7-201ENST00000456186 273 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 AL136097.1-201ENST00000456945 913 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN9O95484 AP000893.1-201ENST00000474462 794 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 AC112518.2-201ENST00000508565 425 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 PCBP2P3-201ENST00000509726 843 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 AC005921.1-201ENST00000510589 286 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 AC023141.12-201ENST00000512399 199 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN9O95484 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN9O95484 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.43□□□□□ -1.86
CLDN9O95484 MIR4425-201ENST00000580572 84 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 AC007687.1-201ENST00000602704 304 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 AL391497.1-201ENST00000608671 547 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN9O95484 U73479.1-201ENST00000618062 168 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 U7.8-201ENST00000619968 63 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 AC022149.2-201ENST00000621061 203 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN9O95484 PABPC1P7-201ENST00000413177 1513 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN9O95484 AL157700.1-201ENST00000561973 1432 ntBASIC3.43□□□□□ -1.86
CLDN9O95484 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN9O95484 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN9O95484 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN9O95484 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CLDN9O95484 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN9O95484 RNA5SP51-201ENST00000364750 119 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 SNORA62.3-201ENST00000365110 153 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 SNORA70.4-201ENST00000365509 134 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 RNU6-444P-201ENST00000383988 108 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 RNU6-761P-201ENST00000384148 107 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 RNA5SP171-201ENST00000391071 115 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 MIR1250-201ENST00000408098 113 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN9O95484 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN9O95484 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN9O95484 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.42□□□□□ -1.86
CLDN9O95484 AL357552.1-201ENST00000445254 415 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 AC007688.1-201ENST00000475592 759 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 AC091959.2-201ENST00000477363 321 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 SETP14-201ENST00000497538 873 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 OR5H3P-201ENST00000502817 919 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN9O95484 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.42□□□□□ -1.86
CLDN9O95484 HIGD1AP6-201ENST00000521833 279 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 MTCO1P49-201ENST00000523429 802 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 OR4R3P-201ENST00000525084 838 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 AL139174.1-201ENST00000531489 886 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN9O95484 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.42□□□□□ -1.86
CLDN9O95484 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.42□□□□□ -1.86
CLDN9O95484 TGIF1P1-201ENST00000558095 802 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN9O95484 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN9O95484 OR4G1P-201ENST00000588632 938 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN9O95484 Z82195.1-201ENST00000604558 398 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 HSPE1P14-201ENST00000605812 302 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 MIR8084-201ENST00000614105 89 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 AC112200.1-201ENST00000625015 234 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 AC119674.1-207ENST00000641355 633 ntBASIC3.42□□□□□ -1.86
CLDN9O95484 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
CLDN9O95484 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN9O95484 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CLDN9O95484 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN9O95484 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN9O95484 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN9O95484 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN9O95484 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN9O95484 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN9O95484 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms