Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 BPIFA4P-203ENST00000603168 689 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 AC112187.2-201ENST00000604345 283 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.81□□□□□ -1.48
VAMP4O75379 AP002360.3-201ENST00000607673 710 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 AC015726.3-201ENST00000624501 418 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.81□□□□□ -1.48
VAMP4O75379 AC099654.14-201ENST00000638599 341 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
VAMP4O75379 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VAMP4O75379 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.81□□□□□ -1.48
VAMP4O75379 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
VAMP4O75379 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VAMP4O75379 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP4O75379 MTND4P16-201ENST00000466108 1367 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
VAMP4O75379 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
VAMP4O75379 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
VAMP4O75379 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP4O75379 DCAF13P1-201ENST00000495256 1330 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP4O75379 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
VAMP4O75379 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP4O75379 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP4O75379 RNU6-251P-201ENST00000363235 104 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 RNU6-694P-201ENST00000364071 147 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.8□□□□□ -1.48
VAMP4O75379 RNU6-114P-201ENST00000384704 105 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 AL359643.1-201ENST00000404109 423 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 CIR1P3-201ENST00000405137 479 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.8□□□□□ -1.48
VAMP4O75379 HMGB1P11-201ENST00000413899 637 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 USP9YP13-201ENST00000417797 480 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 AC083875.1-201ENST00000419509 405 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 AL732292.1-201ENST00000426692 226 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 RPL34P6-201ENST00000432390 345 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.8□□□□□ -1.48
VAMP4O75379 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.8□□□□□ -1.48
VAMP4O75379 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.8□□□□□ -1.48
VAMP4O75379 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.8□□□□□ -1.48
VAMP4O75379 snoU109.1-201ENST00000459339 135 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 RPS4XP18-201ENST00000495480 763 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP4O75379 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.8□□□□□ -1.48
VAMP4O75379 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.8□□□□□ -1.48
VAMP4O75379 AP002748.2-201ENST00000528671 348 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.8□□□□□ -1.48
VAMP4O75379 ADI1P3-201ENST00000549509 470 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 AC009852.2-201ENST00000567898 485 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC5.8□□□□□ -1.48
VAMP4O75379 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.8□□□□□ -1.48
VAMP4O75379 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.8□□□□□ -1.48
VAMP4O75379 VN1R79P-201ENST00000593540 513 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.8□□□□□ -1.48
VAMP4O75379 AC108479.2-201ENST00000617314 601 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 AC072046.2-201ENST00000618366 268 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 AC092794.2-201ENST00000620933 563 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 AC005086.4-201ENST00000623065 213 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 AC026523.2-201ENST00000625039 7739 ntBASIC5.8□□□□□ -1.48
VAMP4O75379 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP4O75379 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.8□□□□□ -1.48
VAMP4O75379 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.8□□□□□ -1.48
VAMP4O75379 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
VAMP4O75379 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
VAMP4O75379 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP4O75379 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP4O75379 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VAMP4O75379 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
VAMP4O75379 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VAMP4O75379 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.79□□□□□ -1.48
VAMP4O75379 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
VAMP4O75379 AL450326.2-201ENST00000421913 1962 ntBASIC5.79□□□□□ -1.48
VAMP4O75379 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
VAMP4O75379 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.79□□□□□ -1.48
VAMP4O75379 RNU1-32P-201ENST00000363937 159 ntBASIC5.79□□□□□ -1.48
VAMP4O75379 SNORD96B-201ENST00000386148 79 ntBASIC5.79□□□□□ -1.48
VAMP4O75379 AC025750.1-201ENST00000399891 379 ntBASIC5.79□□□□□ -1.48
VAMP4O75379 Y_RNA.598-201ENST00000410480 95 ntBASIC5.79□□□□□ -1.48
VAMP4O75379 AC073264.1-201ENST00000411508 416 ntBASIC5.79□□□□□ -1.48
VAMP4O75379 AC109780.2-201ENST00000413467 845 ntBASIC5.79□□□□□ -1.48
VAMP4O75379 CCDC58P2-201ENST00000417131 366 ntBASIC5.79□□□□□ -1.48
VAMP4O75379 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.79□□□□□ -1.48
VAMP4O75379 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.79□□□□□ -1.48
VAMP4O75379 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.79□□□□□ -1.48
VAMP4O75379 AC092427.1-201ENST00000439177 601 ntBASIC5.79□□□□□ -1.48
VAMP4O75379 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.79□□□□□ -1.48
VAMP4O75379 AL022238.1-201ENST00000442557 355 ntBASIC5.79□□□□□ -1.48
VAMP4O75379 FHP1-201ENST00000442741 703 ntBASIC5.79□□□□□ -1.48
VAMP4O75379 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VAMP4O75379 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.79□□□□□ -1.48
VAMP4O75379 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VAMP4O75379 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.79□□□□□ -1.48
VAMP4O75379 AC108941.1-201ENST00000502853 530 ntBASIC5.79□□□□□ -1.48
VAMP4O75379 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.79□□□□□ -1.48
VAMP4O75379 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VAMP4O75379 AC021678.1-201ENST00000505195 936 ntBASIC5.79□□□□□ -1.48
VAMP4O75379 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.79□□□□□ -1.48
VAMP4O75379 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.79□□□□□ -1.48
VAMP4O75379 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.79□□□□□ -1.48
VAMP4O75379 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.79□□□□□ -1.48
VAMP4O75379 AC233280.2-201ENST00000603917 1070 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms