Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PABPC1P7-201ENST00000413177 1513 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.66□□□□□ -1.66
PHGDHO43175 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PHGDHO43175 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PHGDHO43175 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PHGDHO43175 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.66□□□□□ -1.66
PHGDHO43175 BTBD10P1-201ENST00000549824 1352 ntBASIC4.65□□□□□ -1.66
PHGDHO43175 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.65□□□□□ -1.66
PHGDHO43175 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
PHGDHO43175 EIF2AP4-201ENST00000424793 1781 ntBASIC4.65□□□□□ -1.66
PHGDHO43175 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.65□□□□□ -1.66
PHGDHO43175 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.65□□□□□ -1.66
PHGDHO43175 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.65□□□□□ -1.66
PHGDHO43175 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PHGDHO43175 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PHGDHO43175 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PHGDHO43175 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.65□□□□□ -1.66
PHGDHO43175 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PHGDHO43175 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PHGDHO43175 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PHGDHO43175 KPNA2P2-201ENST00000419546 1489 ntBASIC4.65□□□□□ -1.66
PHGDHO43175 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PHGDHO43175 RN7SKP104-201ENST00000362605 328 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 RNU5E-5P-201ENST00000365379 116 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 RNU6-744P-201ENST00000365557 107 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 AC019155.1-201ENST00000382242 574 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 RNU6-1316P-201ENST00000384242 108 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 RNU6-769P-201ENST00000384407 104 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 MIR105-2-201ENST00000385083 81 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 MIR1178-201ENST00000408396 91 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 MTCO1P17-201ENST00000411522 491 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 AC009237.10-201ENST00000414112 510 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 CDK8P2-201ENST00000415020 547 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.65□□□□□ -1.67
PHGDHO43175 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.65□□□□□ -1.67
PHGDHO43175 BX510359.3-201ENST00000422168 306 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PHGDHO43175 RPS3AP54-201ENST00000435535 734 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 SDCBPP1-201ENST00000440192 890 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.65□□□□□ -1.67
PHGDHO43175 GDI2P2-201ENST00000445131 608 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 AL592447.1-201ENST00000447592 540 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.65□□□□□ -1.67
PHGDHO43175 AP001025.2-201ENST00000490908 477 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 OR5H5P-201ENST00000503164 928 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 PRELID3BP7-201ENST00000503606 469 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 GAPDHP56-201ENST00000506031 988 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 AC008638.1-201ENST00000506035 866 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.65□□□□□ -1.67
PHGDHO43175 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.65□□□□□ -1.67
PHGDHO43175 FABP5P5-201ENST00000515537 406 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.65□□□□□ -1.67
PHGDHO43175 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PHGDHO43175 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.65□□□□□ -1.67
PHGDHO43175 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.65□□□□□ -1.67
PHGDHO43175 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.65□□□□□ -1.67
PHGDHO43175 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.65□□□□□ -1.67
PHGDHO43175 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.65□□□□□ -1.67
PHGDHO43175 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PHGDHO43175 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.65□□□□□ -1.67
PHGDHO43175 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.65□□□□□ -1.67
PHGDHO43175 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.65□□□□□ -1.67
PHGDHO43175 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PHGDHO43175 AC100793.4-201ENST00000613683 429 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 AL590240.3-201ENST00000621416 943 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 AL359715.5-201ENST00000623431 443 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 AL392088.2-201ENST00000637607 285 ntBASIC4.65□□□□□ -1.67
PHGDHO43175 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.65□□□□□ -1.67
PHGDHO43175 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.65□□□□□ -1.67
PHGDHO43175 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
PHGDHO43175 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PHGDHO43175 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
PHGDHO43175 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PHGDHO43175 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PHGDHO43175 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
PHGDHO43175 IQCB2P-201ENST00000401788 1633 ntBASIC4.64□□□□□ -1.67
PHGDHO43175 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.64□□□□□ -1.67
PHGDHO43175 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PHGDHO43175 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.64□□□□□ -1.67
PHGDHO43175 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.64□□□□□ -1.67
PHGDHO43175 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PHGDHO43175 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PHGDHO43175 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PHGDHO43175 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PHGDHO43175 RNA5SP191-201ENST00000362585 102 ntBASIC4.64□□□□□ -1.67
PHGDHO43175 RNA5SP305-201ENST00000362665 119 ntBASIC4.64□□□□□ -1.67
PHGDHO43175 RNU6-1119P-201ENST00000384349 108 ntBASIC4.64□□□□□ -1.67
PHGDHO43175 RNU6-809P-201ENST00000384461 107 ntBASIC4.64□□□□□ -1.67
PHGDHO43175 MT-TC-201ENST00000387405 66 ntBASIC4.64□□□□□ -1.67
PHGDHO43175 DEFB108C-201ENST00000400154 252 ntBASIC4.64□□□□□ -1.67
PHGDHO43175 RNU2-15P-201ENST00000410692 191 ntBASIC4.64□□□□□ -1.67
PHGDHO43175 AC007899.1-201ENST00000412776 775 ntBASIC4.64□□□□□ -1.67
PHGDHO43175 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.64□□□□□ -1.67
PHGDHO43175 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.64□□□□□ -1.67
PHGDHO43175 OFD1P18Y-201ENST00000420889 959 ntBASIC4.64□□□□□ -1.67
PHGDHO43175 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.64□□□□□ -1.67
PHGDHO43175 AL445669.1-201ENST00000426743 755 ntBASIC4.64□□□□□ -1.67
PHGDHO43175 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.64□□□□□ -1.67
PHGDHO43175 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.64□□□□□ -1.67
PHGDHO43175 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms