Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SNORA60-201ENST00000362396 134 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 RNU6-283P-201ENST00000364788 107 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 RNU6-549P-201ENST00000384433 107 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 RNU1-13P-201ENST00000384499 162 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 RNU6-1000P-201ENST00000391066 106 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 FABP12P1-201ENST00000401911 322 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 AC096533.1-201ENST00000411645 353 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.63□□□□□ -1.83
PDLIM1O00151 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.63□□□□□ -1.83
PDLIM1O00151 AC108032.1-201ENST00000416706 207 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 NUP35P2-201ENST00000416748 943 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 RPS15AP40-201ENST00000419621 391 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 PTP4A1P7-201ENST00000423476 514 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.63□□□□□ -1.83
PDLIM1O00151 CYCSP43-201ENST00000438233 310 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 RANP8-201ENST00000444720 713 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.63□□□□□ -1.83
PDLIM1O00151 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.63□□□□□ -1.83
PDLIM1O00151 AC091179.1-201ENST00000461606 579 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.63□□□□□ -1.83
PDLIM1O00151 AC008427.1-201ENST00000503102 655 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PDLIM1O00151 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.63□□□□□ -1.83
PDLIM1O00151 RPL12P22-201ENST00000519073 490 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.63□□□□□ -1.83
PDLIM1O00151 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PDLIM1O00151 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.63□□□□□ -1.83
PDLIM1O00151 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.63□□□□□ -1.83
PDLIM1O00151 TGIF1P1-201ENST00000558095 802 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 BPTFP1-201ENST00000579209 492 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 AC017100.2-201ENST00000584628 355 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 VN1R87P-201ENST00000596706 487 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 AC008687.2-201ENST00000597865 520 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 BNIP3P27-201ENST00000599991 412 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.63□□□□□ -1.83
PDLIM1O00151 AC113194.1-201ENST00000606037 500 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.63□□□□□ -1.83
PDLIM1O00151 MIR6867-201ENST00000610636 67 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.63□□□□□ -1.83
PDLIM1O00151 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.63□□□□□ -1.83
PDLIM1O00151 AL049777.1-201ENST00000622740 518 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 AC010872.1-201ENST00000624225 675 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 RNA5SP196-201ENST00000625967 102 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.63□□□□□ -1.83
PDLIM1O00151 AL356118.1-201ENST00000635272 1078 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 BX649567.1-201ENST00000642071 1134 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.63□□□□□ -1.83
PDLIM1O00151 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PDLIM1O00151 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PDLIM1O00151 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PDLIM1O00151 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PDLIM1O00151 MTND4P8-201ENST00000514997 1362 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 PWAR6-201ENST00000552334 4618 ntBASIC3.63□□□□□ -1.83
PDLIM1O00151 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PDLIM1O00151 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PDLIM1O00151 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PDLIM1O00151 RNA5SP399-201ENST00000364003 117 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 RNA5SP130-201ENST00000364431 114 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.62□□□□□ -1.83
PDLIM1O00151 DYNLT3P1-201ENST00000378574 347 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PDLIM1O00151 RNU6-1293P-201ENST00000384077 107 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 RNU11-4P-201ENST00000391149 133 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.62□□□□□ -1.83
PDLIM1O00151 RPL7P27-201ENST00000403775 720 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 RNA5SP31-201ENST00000411144 127 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.62□□□□□ -1.83
PDLIM1O00151 TPT1P2-201ENST00000413105 503 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.62□□□□□ -1.83
PDLIM1O00151 DPPA2P1-201ENST00000428060 556 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 RPL23AP69-201ENST00000431134 458 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 B3GNT2P1-201ENST00000434960 952 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 OR4C10P-201ENST00000434991 931 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.62□□□□□ -1.83
PDLIM1O00151 ARF4P4-201ENST00000439608 520 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 RPL29P29-201ENST00000448725 423 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.62□□□□□ -1.83
PDLIM1O00151 AC098824.1-201ENST00000453565 980 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 snoU13.7-201ENST00000459220 104 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.62□□□□□ -1.83
PDLIM1O00151 PRDX3P4-201ENST00000470828 747 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.62□□□□□ -1.83
PDLIM1O00151 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.62□□□□□ -1.83
PDLIM1O00151 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.62□□□□□ -1.83
PDLIM1O00151 SUMO2P5-201ENST00000506790 245 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.62□□□□□ -1.83
PDLIM1O00151 AC093755.1-201ENST00000512950 1023 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 AC119751.1-201ENST00000513357 765 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 MTCO1P35-201ENST00000515270 228 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 RNU6-202P-201ENST00000515998 96 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.62□□□□□ -1.83
PDLIM1O00151 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.62□□□□□ -1.83
PDLIM1O00151 OR8L1P-201ENST00000534005 955 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.62□□□□□ -1.83
PDLIM1O00151 AC004217.3-201ENST00000551552 878 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.62□□□□□ -1.83
PDLIM1O00151 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.62□□□□□ -1.83
PDLIM1O00151 AC007224.1-201ENST00000564410 144 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.62□□□□□ -1.83
PDLIM1O00151 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms