Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AL590139.1-201ENST00000416267 400 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 CYCSP10-201ENST00000417973 294 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AC104333.2-201ENST00000422630 192 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 USP9YP28-201ENST00000435142 589 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 PRPF38AP2-201ENST00000438179 851 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AC127537.2-201ENST00000439258 465 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 snoU13.8-201ENST00000458890 104 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AP001992.1-205ENST00000462248 379 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AC140172.1-201ENST00000502928 141 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AC093853.1-201ENST00000515689 483 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AP003392.2-201ENST00000527269 208 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AC006349.1-201ENST00000555526 235 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AC009117.1-201ENST00000563948 554 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 MIR5697-201ENST00000578045 78 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 MIR4737-201ENST00000583979 81 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 DEFB131E-202ENST00000602581 683 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AC091805.2-201ENST00000603848 235 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AC092354.2-201ENST00000607786 514 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AC105429.2-201ENST00000610567 517 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 Z99129.1-201ENST00000612510 255 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AL596245.1-201ENST00000618994 362 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AC018755.4-201ENST00000619715 454 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AL603839.4-201ENST00000624658 1005 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 FAM91A3P-201ENST00000456826 2544 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AC091046.3-201ENST00000631455 1574 ntBASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA3Q9Y5H0 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHGA3Q9Y5H0 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHGA3Q9Y5H0 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHGA3Q9Y5H0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.62
PCDHGA3Q9Y5H0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHGA3Q9Y5H0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHGA3Q9Y5H0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHGA3Q9Y5H0 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHGA3Q9Y5H0 AP002001.2-201ENST00000529025 1469 ntBASIC4.9□□□□□ -1.62
PCDHGA3Q9Y5H0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.9□□□□□ -1.62
PCDHGA3Q9Y5H0 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 RN7SKP153-201ENST00000365026 316 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 RNA5SP428-201ENST00000365129 132 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 RNU6-744P-201ENST00000365557 107 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 RNU6-533P-201ENST00000384144 107 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 RNU6-1316P-201ENST00000384242 108 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 MT-TC-201ENST00000387405 66 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 SNORA40.3-201ENST00000390964 122 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 OR8F1P-201ENST00000425243 930 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AL356583.2-201ENST00000426536 280 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 RPS27AP12-201ENST00000429552 465 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 Z74696.2-201ENST00000436514 498 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 RSU1P2-202ENST00000437884 485 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 MTND6P18-201ENST00000439477 513 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AP000542.1-201ENST00000448473 371 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AL590365.1-201ENST00000450788 243 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 RPS20P24-201ENST00000457473 361 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AC006463.2-201ENST00000473326 348 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AC022133.1-201ENST00000490961 571 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 OR5H5P-201ENST00000503164 928 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 NIFKP7-201ENST00000503365 834 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AC113430.1-201ENST00000506872 718 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms