Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 Y_RNA.41-201ENST00000362646 102 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 RNU6-1339P-201ENST00000363574 91 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 RNU6-621P-201ENST00000364752 109 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 Y_RNA.359-201ENST00000365498 102 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 RNA5SP306-201ENST00000411087 107 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 RPL17P36-201ENST00000420302 549 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 RPL7P31-201ENST00000450192 724 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 ABCF2P2-201ENST00000450549 296 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 DDX39BP2-208ENST00000453923 258 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 RPS23P7-201ENST00000466210 444 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC017037.1-201ENST00000508460 471 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC008885.2-201ENST00000509506 930 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC104108.1-201ENST00000509930 412 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AP002812.4-201ENST00000532139 286 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC005832.3-201ENST00000537929 631 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC008083.2-201ENST00000546707 476 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 UBE2FP2-201ENST00000566646 462 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 MIR4284-201ENST00000578924 81 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 MIR4801-201ENST00000582704 82 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC022146.1-201ENST00000595307 847 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 U73023.1-201ENST00000603134 700 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 BPIFA4P-203ENST00000603168 689 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC103792.1-201ENST00000603591 919 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AL592221.1-201ENST00000605266 382 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 HMGB1P50-201ENST00000605814 607 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC068944.2-201ENST00000610373 403 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC078899.5-201ENST00000612475 178 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AL359715.5-201ENST00000623431 443 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC008785.1-201ENST00000624475 456 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 PCMTD1P7-201ENST00000634506 357 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AC006927.3-201ENST00000638789 384 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 MTND4P34-201ENST00000572715 1371 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AL136964.1-201ENST00000622038 2990 ntBASIC4.09□□□□□ -1.75
PCDHGB1Q9Y5G3 AL137100.1-201ENST00000556703 1620 ntBASIC4.09□□□□□ -1.76
PCDHGB1Q9Y5G3 AL391684.1-202ENST00000641293 1636 ntBASIC4.09□□□□□ -1.76
PCDHGB1Q9Y5G3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PCDHGB1Q9Y5G3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.09□□□□□ -1.76
PCDHGB1Q9Y5G3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PCDHGB1Q9Y5G3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
PCDHGB1Q9Y5G3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 AC079741.1-201ENST00000321498 212 ntBASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 RNU6-666P-201ENST00000363499 107 ntBASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 SNORA70.2-201ENST00000364506 135 ntBASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 RNU6-1279P-201ENST00000383917 103 ntBASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 SDHCP2-201ENST00000398565 501 ntBASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 RN7SKP142-201ENST00000411236 328 ntBASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 TPMTP3-201ENST00000411928 735 ntBASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 RPL7P8-201ENST00000411964 730 ntBASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 AC069213.2-201ENST00000420238 366 ntBASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 RAD23BP1-201ENST00000421404 1227 ntBASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 MTCO1P54-201ENST00000430139 712 ntBASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 OR6C5P-201ENST00000452388 923 ntBASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 KATNBL1P6-201ENST00000453433 915 ntBASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHGB1Q9Y5G3 RPL5P24-201ENST00000463742 885 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms