Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
MRPS28Q9Y2Q9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
MRPS28Q9Y2Q9 IQCB2P-201ENST00000401788 1633 ntBASIC3.65□□□□□ -1.83
MRPS28Q9Y2Q9 ELL2P3-201ENST00000457883 1602 ntBASIC3.65□□□□□ -1.83
MRPS28Q9Y2Q9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
MRPS28Q9Y2Q9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
MRPS28Q9Y2Q9 AL390862.1-201ENST00000635467 1469 ntBASIC3.65□□□□□ -1.83
MRPS28Q9Y2Q9 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.83
MRPS28Q9Y2Q9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
MRPS28Q9Y2Q9 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.65□□□□□ -1.83
MRPS28Q9Y2Q9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
MRPS28Q9Y2Q9 AL353743.4-201ENST00000422653 1547 ntBASIC3.65□□□□□ -1.83
MRPS28Q9Y2Q9 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 SNORA51.12-201ENST00000384448 134 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 RNU6-1300P-201ENST00000391046 108 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 RNA5SP39-201ENST00000411245 120 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 PIGPP2-201ENST00000411569 458 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AC092647.1-201ENST00000420654 287 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AL050321.1-201ENST00000432363 400 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 ACTR3P2-201ENST00000439585 1257 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 TAF9P1-201ENST00000445421 515 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 RPL12P26-201ENST00000452430 487 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 TAF9P2-201ENST00000454958 515 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 SETP11-201ENST00000473027 690 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 RPL30P6-201ENST00000475925 342 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 BNIP3P41-201ENST00000503774 571 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AF279873.1-201ENST00000523393 313 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AC084824.1-201ENST00000550917 1005 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AC063950.1-201ENST00000552036 308 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 TRAV15-201ENST00000556680 249 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 GTF2IP8-201ENST00000560687 584 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AC005951.1-201ENST00000576706 485 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AP001180.3-201ENST00000582221 145 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AC008782.1-201ENST00000603386 430 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AC099669.2-201ENST00000616549 437 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AC103858.2-201ENST00000621471 543 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AC010608.2-201ENST00000624830 470 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 MKKS-204ENST00000639674 192 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AL356489.2-201ENST00000566968 3528 ntBASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.64□□□□□ -1.83
MRPS28Q9Y2Q9 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 AL445523.1-201ENST00000451184 1362 ntBASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 NOL8P1-201ENST00000508336 3529 ntBASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 Z99496.1-201ENST00000469424 1477 ntBASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 OR5P1P-201ENST00000299512 925 ntBASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 OR4K15-201ENST00000305051 1216 ntBASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 XIAPP3-201ENST00000312918 795 ntBASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 MIR331-201ENST00000362302 94 ntBASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 Y_RNA.51-201ENST00000362725 102 ntBASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 Y_RNA.201-201ENST00000364052 96 ntBASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 RNU4-24P-201ENST00000364565 139 ntBASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 Y_RNA.311-201ENST00000365068 96 ntBASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 Y_RNA.436-201ENST00000384097 102 ntBASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 SNORD116-4-201ENST00000384733 96 ntBASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 RNU2-42P-201ENST00000410697 113 ntBASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 BTF3L4P1-201ENST00000413813 468 ntBASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 FCF1P2-201ENST00000415284 583 ntBASIC3.63□□□□□ -1.83
MRPS28Q9Y2Q9 TMSB10P2-201ENST00000416049 131 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms