Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC023161.2-201ENST00000551218 780 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AC006116.10-201ENST00000591836 581 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 BNIP3P19-201ENST00000605397 577 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 BRDTP1-201ENST00000605735 677 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AC113194.1-201ENST00000606037 500 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AC105429.2-201ENST00000610567 517 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AC018926.1-201ENST00000616335 435 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 RNU6-156P-201ENST00000621869 107 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AL357559.1-201ENST00000622228 274 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AL021368.2-201ENST00000606125 5352 ntBASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AC016716.1-201ENST00000265882 708 ntBASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 RNU6-932P-201ENST00000391108 106 ntBASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 RNU2-21P-201ENST00000410368 188 ntBASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 RPS12P23-201ENST00000419579 400 ntBASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AC246680.2-201ENST00000422106 389 ntBASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 USP12PY-201ENST00000427677 1064 ntBASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AL159987.2-201ENST00000432754 307 ntBASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 PRDX3P3-201ENST00000447765 522 ntBASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 RBMY2UP-201ENST00000453474 324 ntBASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 RPL7P49-201ENST00000471402 708 ntBASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 NIPA2P2-201ENST00000496376 1083 ntBASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 RNU5A-7P-201ENST00000515979 116 ntBASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 MIR7851-201ENST00000610611 160 ntBASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AC008759.3-201ENST00000613300 508 ntBASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 FAM157B-203ENST00000639350 358 ntBASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AC025263.3-201ENST00000622965 1396 ntBASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.2□□□□□ -1.9
CLCF1Q9UBD9 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 MTCO1P12-201ENST00000414273 1543 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 AC006504.1-201ENST00000562493 3666 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 AC234772.1-201ENST00000377927 937 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 RNU6-468P-201ENST00000384003 109 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 RN7SKP177-201ENST00000410567 355 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms