Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MIR1271-201ENST00000408537 86 ntBASIC4.42□□□□□ -1.7
LRFN1Q9P244 RNU6-920P-201ENST00000410926 92 ntBASIC4.42□□□□□ -1.7
LRFN1Q9P244 RSU1P3-201ENST00000412878 835 ntBASIC4.42□□□□□ -1.7
LRFN1Q9P244 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 AIMP1P1-201ENST00000418670 937 ntBASIC4.42□□□□□ -1.7
LRFN1Q9P244 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LRFN1Q9P244 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 AL359265.2-201ENST00000434367 631 ntBASIC4.42□□□□□ -1.7
LRFN1Q9P244 UBE2D3P4-201ENST00000441973 436 ntBASIC4.42□□□□□ -1.7
LRFN1Q9P244 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 RN7SL517P-201ENST00000462240 305 ntBASIC4.42□□□□□ -1.7
LRFN1Q9P244 AC022795.1-201ENST00000473808 480 ntBASIC4.42□□□□□ -1.7
LRFN1Q9P244 OR5BM1P-201ENST00000512021 366 ntBASIC4.42□□□□□ -1.7
LRFN1Q9P244 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 AC040958.1-201ENST00000561102 201 ntBASIC4.42□□□□□ -1.7
LRFN1Q9P244 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 AP001004.1-201ENST00000582468 324 ntBASIC4.42□□□□□ -1.7
LRFN1Q9P244 WISP1-OT1-201ENST00000602893 642 ntBASIC4.42□□□□□ -1.7
LRFN1Q9P244 AC103792.1-201ENST00000603591 919 ntBASIC4.42□□□□□ -1.7
LRFN1Q9P244 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 COX6CP4-201ENST00000605798 228 ntBASIC4.42□□□□□ -1.7
LRFN1Q9P244 AC083809.1-201ENST00000615051 472 ntBASIC4.42□□□□□ -1.7
LRFN1Q9P244 AC091931.1-201ENST00000623488 728 ntBASIC4.42□□□□□ -1.7
LRFN1Q9P244 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.42□□□□□ -1.7
LRFN1Q9P244 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.42□□□□□ -1.7
LRFN1Q9P244 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRFN1Q9P244 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LRFN1Q9P244 AC010928.1-201ENST00000592477 1447 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LRFN1Q9P244 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LRFN1Q9P244 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LRFN1Q9P244 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 AL590240.1-201ENST00000334118 313 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 RNU6-289P-201ENST00000364093 107 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 AC007066.1-201ENST00000392902 381 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 RN7SKP106-201ENST00000410832 272 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 RNU4-78P-201ENST00000410940 126 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 AL512649.1-201ENST00000428997 581 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 RPS17P8-201ENST00000434525 335 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 ELOCP8-201ENST00000439309 332 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 ELOCP15-201ENST00000442090 332 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 Z95327.1-201ENST00000446082 482 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LRFN1Q9P244 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 PAXBP1P1-201ENST00000449315 447 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 AC091564.1-201ENST00000464563 479 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 AC021660.1-201ENST00000465006 554 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 RPS6P4-201ENST00000494693 758 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 AC092045.1-201ENST00000495716 1231 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 SCARNA22-201ENST00000503991 125 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 AC117522.2-201ENST00000510049 657 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 TXNP6-201ENST00000510190 310 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 RNU2-30P-201ENST00000516209 141 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 RNU1-6P-201ENST00000516290 144 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LRFN1Q9P244 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 AL356057.1-201ENST00000533798 831 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 AC110760.3-201ENST00000598794 467 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 MTCYBP22-201ENST00000603788 447 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 AL365503.1-201ENST00000605247 905 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 AL391684.1-202ENST00000641293 1636 ntBASIC4.41□□□□□ -1.7
LRFN1Q9P244 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LRFN1Q9P244 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LRFN1Q9P244 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms