Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RPL23AP62-201ENST00000463396 453 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AC010683.1-201ENST00000473673 378 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 RPS27P23-201ENST00000487608 251 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 RPL7P47-201ENST00000497299 556 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 COX6B1P6-201ENST00000522347 255 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 OR5AP1P-201ENST00000529730 940 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AC061975.8-201ENST00000587058 721 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 KLKP1-201ENST00000595979 403 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 RPL12P25-202ENST00000598100 674 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AC010680.4-201ENST00000605334 543 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AL592148.2-201ENST00000612210 372 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 MIR6780A-201ENST00000615089 68 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AC011944.2-201ENST00000624440 683 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 OR1S1-201ENST00000624470 978 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AC019226.2-201ENST00000625973 424 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 MIR7153-201ENST00000637758 57 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AP002001.2-201ENST00000529025 1469 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 RNU4-92P-201ENST00000363783 136 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 RNU4-28P-201ENST00000364739 141 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 MIR124-3-201ENST00000384866 87 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 MIR199A2-201ENST00000385289 110 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 RNU6-328P-201ENST00000390887 106 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 GSTA8P-201ENST00000404253 637 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 RPS24P7-201ENST00000416921 246 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC010099.3-201ENST00000423896 409 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 RPS29P17-201ENST00000430795 166 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC084290.1-201ENST00000434995 374 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 CEACAMP9-201ENST00000442990 513 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 MTND2P28-201ENST00000457540 1044 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC010468.1-201ENST00000461022 817 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 RPS29P22-201ENST00000472363 168 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC012170.1-201ENST00000495139 359 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC109471.1-201ENST00000511631 612 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC010285.3-201ENST00000511668 676 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 PDCL2P2-201ENST00000533651 189 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC090312.2-201ENST00000582687 378 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AP001269.3-201ENST00000588718 329 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC115621.1-201ENST00000604653 858 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC012531.5-201ENST00000611375 151 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC231759.1-201ENST00000616455 597 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC109454.4-201ENST00000623411 649 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AC087821.2-201ENST00000637086 450 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 AL353743.4-201ENST00000422653 1547 ntBASIC3.69□□□□□ -1.82
NDE1Q9NXR1 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.69□□□□□ -1.82
NDE1Q9NXR1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 NACA3P-201ENST00000359690 648 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms