Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 RPS20P32-201ENST00000456044 356 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 AL445433.1-201ENST00000457507 257 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 GYG1P1-201ENST00000460864 698 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 AP000942.1-201ENST00000463969 747 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 AC090686.1-201ENST00000481577 749 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 RNA5SP249-201ENST00000516127 99 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 AC022832.1-201ENST00000530718 645 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 AL118522.2-201ENST00000616045 615 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 AP002505.2-201ENST00000623585 696 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 OR5AK4P-201ENST00000635912 903 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 EIF2AP4-201ENST00000424793 1781 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 AC005832.2-201ENST00000538921 1430 ntBASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.88□□□□□ -1.63
CCM2LQ9NUG4 PABPC1P7-201ENST00000413177 1513 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 AC083843.3-201ENST00000623679 2186 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 FARSBP1-201ENST00000435808 1778 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 RPS20P2-201ENST00000402520 389 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 FCF1P10-201ENST00000407590 479 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 AC007742.1-201ENST00000425789 329 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 MTND3P21-201ENST00000433774 331 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 ELOCP26-201ENST00000436067 329 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 PSMD10P3-201ENST00000437000 448 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 MTCO2P3-201ENST00000442543 421 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 NANOGNBP1-201ENST00000448444 480 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 AC010733.1-201ENST00000451515 401 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 AC098824.1-201ENST00000453565 980 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 AP001992.1-205ENST00000462248 379 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 RPL37P6-202ENST00000464216 403 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 RNA5SP464-201ENST00000516251 108 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 RNU6-430P-201ENST00000517078 107 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 RN7SKP234-201ENST00000517173 224 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 AP000676.2-201ENST00000529711 301 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 AL161713.1-201ENST00000555538 145 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 AC034268.2-201ENST00000571784 482 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 AC126118.1-201ENST00000607744 628 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 AC126915.2-201ENST00000610957 190 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 BTBD10P1-201ENST00000549824 1352 ntBASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCM2LQ9NUG4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms