Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 RPL12P26-201ENST00000452430 487 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 HMGN2P16-201ENST00000456802 261 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 NF1P3-201ENST00000457709 450 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 AC092754.2-201ENST00000463506 460 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 AC087879.1-201ENST00000474343 374 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 AC021205.2-201ENST00000480069 347 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 SYF2P1-201ENST00000550658 413 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 AC017100.2-201ENST00000584628 355 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 OR4G1P-201ENST00000588632 938 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 AC022916.3-201ENST00000592961 742 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 VN1R85P-201ENST00000601587 426 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 IGHV3-29-201ENST00000604817 344 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 U73479.1-201ENST00000618062 168 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 FP236240.3-201ENST00000623061 327 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 MFSD8-236ENST00000641509 4050 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 AC021755.1-201ENST00000559747 1447 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 OR5T3-201ENST00000303059 1023 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 MIR30B-201ENST00000384850 88 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 RPL32P23-201ENST00000397237 405 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 SNORA11C-201ENST00000408532 129 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 AC073264.1-201ENST00000411508 416 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 AIMP1P1-201ENST00000418670 937 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 FAR1P1-201ENST00000427163 934 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 ETF1P3-201ENST00000430422 1160 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 MTND4LP7-201ENST00000431728 294 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 B3GNT2P1-201ENST00000434960 952 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 MTND1P33-201ENST00000446251 917 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 DNAJC19P8-201ENST00000452887 259 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 SYPL1P1-201ENST00000473622 768 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 MIR5685-201ENST00000579080 79 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 AC011816.2-201ENST00000607089 556 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 AC104307.1-201ENST00000616142 196 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 AL732618.1-201ENST00000623251 301 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 AC020923.1-201ENST00000624021 917 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 AL109659.3-201ENST00000624985 950 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 AC007496.3-201ENST00000624987 3443 ntBASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCNB1IP1Q9NPC3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 OR4A15-201ENST00000314706 1035 ntBASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 RNA5SP27-201ENST00000363839 119 ntBASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 ATP5F1P6-201ENST00000402768 767 ntBASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 RPL23AP47-201ENST00000408017 460 ntBASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 U3.39-201ENST00000408569 239 ntBASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 AL591419.1-201ENST00000427423 339 ntBASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 VDAC1P3-201ENST00000434069 851 ntBASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms