Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 DUTP6-201ENST00000425573 462 ntBASIC2.74□□□□□ -1.97
KIAA1549Q9HCM3 HMGB3P6-201ENST00000444896 598 ntBASIC2.74□□□□□ -1.97
KIAA1549Q9HCM3 AL354710.1-201ENST00000453641 246 ntBASIC2.74□□□□□ -1.97
KIAA1549Q9HCM3 RN7SL442P-201ENST00000473804 320 ntBASIC2.74□□□□□ -1.97
KIAA1549Q9HCM3 NDUFB4P9-201ENST00000511646 388 ntBASIC2.74□□□□□ -1.97
KIAA1549Q9HCM3 RN7SKP43-201ENST00000516173 320 ntBASIC2.74□□□□□ -1.97
KIAA1549Q9HCM3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.74□□□□□ -1.97
KIAA1549Q9HCM3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.74□□□□□ -1.97
KIAA1549Q9HCM3 IGHV3-29-201ENST00000604817 344 ntBASIC2.74□□□□□ -1.97
KIAA1549Q9HCM3 AC015849.6-201ENST00000605454 474 ntBASIC2.74□□□□□ -1.97
KIAA1549Q9HCM3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.74□□□□□ -1.97
KIAA1549Q9HCM3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.74□□□□□ -1.97
KIAA1549Q9HCM3 AP003072.5-201ENST00000623872 773 ntBASIC2.74□□□□□ -1.97
KIAA1549Q9HCM3 CR392039.4-201ENST00000624968 501 ntBASIC2.74□□□□□ -1.97
KIAA1549Q9HCM3 CFTRP2-201ENST00000634304 199 ntBASIC2.74□□□□□ -1.97
KIAA1549Q9HCM3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
KIAA1549Q9HCM3 RIOK3P1-201ENST00000418778 1528 ntBASIC2.74□□□□□ -1.97
KIAA1549Q9HCM3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
KIAA1549Q9HCM3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 AL139811.1-201ENST00000424779 2299 ntBASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 RNU6-805P-201ENST00000365643 106 ntBASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 RAB9AP5-201ENST00000437794 597 ntBASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 AC093156.1-201ENST00000440382 670 ntBASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 RAB9AP2-201ENST00000443911 597 ntBASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 AC069540.1-201ENST00000446320 988 ntBASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 PRELID3BP6-201ENST00000503839 571 ntBASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 AC091826.1-201ENST00000514065 313 ntBASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 AC010680.3-201ENST00000604215 520 ntBASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 AC025125.1-201ENST00000624743 1922 ntBASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
KIAA1549Q9HCM3 AL672296.1-201ENST00000427780 2158 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 Y_RNA.111-201ENST00000363248 100 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 EI24P2-201ENST00000397776 1076 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 ELOCP23-201ENST00000452014 332 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AC117440.1-201ENST00000474107 571 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AC114967.1-201ENST00000504890 259 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 MIR4672-201ENST00000583126 81 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 MIR4298-201ENST00000584380 73 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AC110792.3-201ENST00000595906 1614 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 MIR422A-201ENST00000362286 90 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 SNORA62.2-201ENST00000364672 152 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 SNORA9.2-201ENST00000365361 133 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AC245291.1-201ENST00000419501 328 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 SEPT7P6-201ENST00000469999 1143 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AC093331.1-201ENST00000521474 169 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 VN1R90P-201ENST00000595717 726 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AL049844.2-201ENST00000604280 628 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AC123768.4-201ENST00000616244 701 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AC022509.4-201ENST00000621404 572 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AC009313.2-201ENST00000417893 1941 ntBASIC2.72□□□□□ -1.97
KIAA1549Q9HCM3 AL592494.2-201ENST00000425455 1548 ntBASIC2.71□□□□□ -1.97
KIAA1549Q9HCM3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC2.71□□□□□ -1.97
KIAA1549Q9HCM3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
KIAA1549Q9HCM3 RNA5SP383-201ENST00000362934 120 ntBASIC2.71□□□□□ -1.98
KIAA1549Q9HCM3 Y_RNA.500-201ENST00000384466 111 ntBASIC2.71□□□□□ -1.98
KIAA1549Q9HCM3 RNU6-328P-201ENST00000390887 106 ntBASIC2.71□□□□□ -1.98
KIAA1549Q9HCM3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms