Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 RN7SKP222-201ENST00000410651 315 ntBASIC3.44□□□□□ -1.86
TRIM4Q9C037 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM4Q9C037 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM4Q9C037 AJ239321.1-201ENST00000424255 564 ntBASIC3.44□□□□□ -1.86
TRIM4Q9C037 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM4Q9C037 RPL7P46-201ENST00000425129 740 ntBASIC3.44□□□□□ -1.86
TRIM4Q9C037 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM4Q9C037 RPS27P5-201ENST00000444247 244 ntBASIC3.44□□□□□ -1.86
TRIM4Q9C037 RPL26P28-201ENST00000451325 435 ntBASIC3.44□□□□□ -1.86
TRIM4Q9C037 AC084357.1-201ENST00000473404 255 ntBASIC3.44□□□□□ -1.86
TRIM4Q9C037 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM4Q9C037 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
TRIM4Q9C037 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM4Q9C037 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM4Q9C037 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM4Q9C037 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM4Q9C037 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM4Q9C037 AL451007.1-201ENST00000595491 289 ntBASIC3.44□□□□□ -1.86
TRIM4Q9C037 KC877982.1-201ENST00000602313 470 ntBASIC3.44□□□□□ -1.86
TRIM4Q9C037 AC011468.4-201ENST00000603942 409 ntBASIC3.44□□□□□ -1.86
TRIM4Q9C037 AC007620.3-201ENST00000608131 497 ntBASIC3.44□□□□□ -1.86
TRIM4Q9C037 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.44□□□□□ -1.86
TRIM4Q9C037 AC008264.2-201ENST00000610193 3731 ntBASIC3.44□□□□□ -1.86
TRIM4Q9C037 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM4Q9C037 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM4Q9C037 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM4Q9C037 DCAF13P1-201ENST00000495256 1330 ntBASIC3.44□□□□□ -1.86
TRIM4Q9C037 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
TRIM4Q9C037 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM4Q9C037 UBE2V1P2-201ENST00000397758 440 ntBASIC3.43□□□□□ -1.86
TRIM4Q9C037 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM4Q9C037 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.43□□□□□ -1.86
TRIM4Q9C037 MTCYBP7-201ENST00000419540 1134 ntBASIC3.43□□□□□ -1.86
TRIM4Q9C037 UBE2V1P1-201ENST00000430836 445 ntBASIC3.43□□□□□ -1.86
TRIM4Q9C037 AC127537.2-201ENST00000439258 465 ntBASIC3.43□□□□□ -1.86
TRIM4Q9C037 HSPE1P28-201ENST00000443139 211 ntBASIC3.43□□□□□ -1.86
TRIM4Q9C037 SETD6P1-201ENST00000444575 317 ntBASIC3.43□□□□□ -1.86
TRIM4Q9C037 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.43□□□□□ -1.86
TRIM4Q9C037 AC099563.1-201ENST00000456086 418 ntBASIC3.43□□□□□ -1.86
TRIM4Q9C037 AC010683.1-201ENST00000473673 378 ntBASIC3.43□□□□□ -1.86
TRIM4Q9C037 AC096576.1-201ENST00000489014 359 ntBASIC3.43□□□□□ -1.86
TRIM4Q9C037 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.43□□□□□ -1.86
TRIM4Q9C037 AC027309.2-201ENST00000520566 192 ntBASIC3.43□□□□□ -1.86
TRIM4Q9C037 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.43□□□□□ -1.86
TRIM4Q9C037 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM4Q9C037 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.43□□□□□ -1.86
TRIM4Q9C037 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM4Q9C037 AC010735.1-201ENST00000567305 1026 ntBASIC3.43□□□□□ -1.86
TRIM4Q9C037 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM4Q9C037 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.43□□□□□ -1.86
TRIM4Q9C037 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.43□□□□□ -1.86
TRIM4Q9C037 BNIP3P38-201ENST00000601117 544 ntBASIC3.43□□□□□ -1.86
TRIM4Q9C037 AL163642.2-201ENST00000604722 1019 ntBASIC3.43□□□□□ -1.86
TRIM4Q9C037 AC007423.1-201ENST00000605009 627 ntBASIC3.43□□□□□ -1.86
TRIM4Q9C037 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM4Q9C037 AP000553.6-201ENST00000641242 118 ntBASIC3.43□□□□□ -1.86
TRIM4Q9C037 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM4Q9C037 AC093908.1-201ENST00000623125 8092 ntBASIC3.43□□□□□ -1.86
TRIM4Q9C037 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
TRIM4Q9C037 API5P2-201ENST00000397055 1498 ntBASIC3.42□□□□□ -1.86
TRIM4Q9C037 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM4Q9C037 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM4Q9C037 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM4Q9C037 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM4Q9C037 RNU1-33P-201ENST00000364249 162 ntBASIC3.42□□□□□ -1.86
TRIM4Q9C037 OR6K3-202ENST00000368146 996 ntBASIC3.42□□□□□ -1.86
TRIM4Q9C037 AC234772.1-201ENST00000377927 937 ntBASIC3.42□□□□□ -1.86
TRIM4Q9C037 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
TRIM4Q9C037 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM4Q9C037 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.42□□□□□ -1.86
TRIM4Q9C037 RPF2P1-201ENST00000424137 906 ntBASIC3.42□□□□□ -1.86
TRIM4Q9C037 RPS7P5-201ENST00000441482 581 ntBASIC3.42□□□□□ -1.86
TRIM4Q9C037 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.42□□□□□ -1.86
TRIM4Q9C037 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM4Q9C037 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.42□□□□□ -1.86
TRIM4Q9C037 U3.44-201ENST00000458938 192 ntBASIC3.42□□□□□ -1.86
TRIM4Q9C037 AC006511.1-201ENST00000470614 315 ntBASIC3.42□□□□□ -1.86
TRIM4Q9C037 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.42□□□□□ -1.86
TRIM4Q9C037 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.42□□□□□ -1.86
TRIM4Q9C037 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.42□□□□□ -1.86
TRIM4Q9C037 MTND4LP22-201ENST00000508209 276 ntBASIC3.42□□□□□ -1.86
TRIM4Q9C037 AC118465.1-201ENST00000513820 1271 ntBASIC3.42□□□□□ -1.86
TRIM4Q9C037 HIGD1AP3-201ENST00000515857 278 ntBASIC3.42□□□□□ -1.86
TRIM4Q9C037 AC104027.1-201ENST00000521887 300 ntBASIC3.42□□□□□ -1.86
TRIM4Q9C037 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM4Q9C037 TRAV15-201ENST00000556680 249 ntBASIC3.42□□□□□ -1.86
TRIM4Q9C037 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.42□□□□□ -1.86
TRIM4Q9C037 AC136601.2-201ENST00000604356 474 ntBASIC3.42□□□□□ -1.86
TRIM4Q9C037 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.42□□□□□ -1.86
TRIM4Q9C037 AL732372.2-225ENST00000642124 456 ntBASIC3.42□□□□□ -1.86
TRIM4Q9C037 AC093010.3-201ENST00000570269 15214 ntBASIC3.42□□□□□ -1.86
TRIM4Q9C037 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM4Q9C037 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.42□□□□□ -1.86
TRIM4Q9C037 MTCO1P24-201ENST00000515438 1558 ntBASIC3.42□□□□□ -1.86
TRIM4Q9C037 AC090337.1-201ENST00000579651 2074 ntBASIC3.41□□□□□ -1.86
TRIM4Q9C037 RNA5SP126-201ENST00000365092 109 ntBASIC3.41□□□□□ -1.86
TRIM4Q9C037 ARF4P3-201ENST00000397387 509 ntBASIC3.41□□□□□ -1.86
TRIM4Q9C037 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM4Q9C037 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM4Q9C037 AC245054.1-201ENST00000420944 258 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms