Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AL136531.3-201ENST00000624378 3658 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 Y_RNA.275-201ENST00000364726 110 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 RNU6-827P-201ENST00000365553 106 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AMELY-202ENST00000383036 621 ntTSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 Y_RNA.435-201ENST00000384095 112 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 Y_RNA.497-201ENST00000384447 98 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 GLULP6-201ENST00000399502 913 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 MIR1250-201ENST00000408098 113 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 RNU2-43P-201ENST00000410306 190 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 RNU6-1135P-201ENST00000411083 103 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 TMSB10P2-201ENST00000416049 131 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 HMGN2P24-201ENST00000433516 273 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 CYP2C56P-201ENST00000440076 291 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 Y_RNA.638-201ENST00000459374 113 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 RPS18P13-201ENST00000461260 454 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 RPL37P6-202ENST00000464216 403 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 RN7SL520P-201ENST00000474110 286 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 RPL30P1-201ENST00000488676 339 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 LINC01085-203ENST00000511195 326 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 IGLV1-62-201ENST00000518003 441 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AC130366.1-201ENST00000526505 1192 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 SOX5-213ENST00000541847 758 ntTSL 3 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AC027667.1-201ENST00000545814 304 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 H3F3AP1-201ENST00000559984 334 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 RN7SL42P-201ENST00000579786 294 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AC024267.2-201ENST00000582737 417 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 RN7SL667P-201ENST00000582817 298 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AC087575.1-201ENST00000585087 229 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AC018737.1-201ENST00000603900 204 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AP001554.1-201ENST00000604533 376 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 MIR6751-201ENST00000610479 63 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AC073488.7-201ENST00000633785 778 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AL596275.2-208ENST00000641192 594 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AL078621.3-201ENST00000623707 2042 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-1Q9BYR8 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-1Q9BYR8 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-1Q9BYR8 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-1Q9BYR8 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
KRTAP3-1Q9BYR8 AC011504.1-201ENST00000623331 4103 ntBASIC3.57□□□□□ -1.84
KRTAP3-1Q9BYR8 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-1Q9BYR8 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-1Q9BYR8 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-1Q9BYR8 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC3.57□□□□□ -1.84
KRTAP3-1Q9BYR8 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-1Q9BYR8 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-1Q9BYR8 RNU6-37P-201ENST00000362692 107 ntBASIC3.57□□□□□ -1.84
KRTAP3-1Q9BYR8 RNU6-1155P-201ENST00000363554 107 ntBASIC3.57□□□□□ -1.84
KRTAP3-1Q9BYR8 RNA5SP260-201ENST00000363849 111 ntBASIC3.57□□□□□ -1.84
KRTAP3-1Q9BYR8 RNU6-11P-201ENST00000364234 107 ntBASIC3.57□□□□□ -1.84
KRTAP3-1Q9BYR8 RNA5SP512-201ENST00000364550 120 ntBASIC3.57□□□□□ -1.84
KRTAP3-1Q9BYR8 RNU6-7-201ENST00000364784 107 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms