Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SSX3Q99909 RPS4XP5-202ENST00000449995 1334 ntBASIC3.6□□□□□ -1.83
SSX3Q99909 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SSX3Q99909 AP001148.1-201ENST00000624124 2359 ntBASIC3.6□□□□□ -1.83
SSX3Q99909 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SSX3Q99909 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.6□□□□□ -1.83
SSX3Q99909 ZNF962P-201ENST00000443465 3140 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SSX3Q99909 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SSX3Q99909 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SSX3Q99909 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
SSX3Q99909 RNA5SP258-201ENST00000362750 119 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 SUGT1P1-201ENST00000379514 476 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
SSX3Q99909 U1.1-201ENST00000384101 164 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 Y_RNA.472-201ENST00000384322 102 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.59□□□□□ -1.83
SSX3Q99909 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.59□□□□□ -1.83
SSX3Q99909 AL133384.1-201ENST00000412744 351 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 AC011933.1-201ENST00000413334 321 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 KRR1P1-201ENST00000419430 803 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.59□□□□□ -1.83
SSX3Q99909 FNDC3CP-201ENST00000420795 1155 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 AC007435.1-201ENST00000421086 415 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 CHIAP3-201ENST00000423668 1133 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 MTCO2P23-201ENST00000425216 680 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 RPL31P54-201ENST00000429803 370 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 MOB1AP1-201ENST00000430903 535 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
SSX3Q99909 MRPS18BP2-201ENST00000434310 759 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.59□□□□□ -1.83
SSX3Q99909 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.59□□□□□ -1.83
SSX3Q99909 AL034418.1-201ENST00000448675 860 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.59□□□□□ -1.83
SSX3Q99909 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.59□□□□□ -1.83
SSX3Q99909 PNPLA4P1-201ENST00000458328 305 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 snoU13.24-201ENST00000458998 104 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 AC116533.1-201ENST00000459748 321 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
SSX3Q99909 AC053481.1-201ENST00000467217 306 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 AC109327.1-201ENST00000471666 403 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.59□□□□□ -1.83
SSX3Q99909 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.59□□□□□ -1.83
SSX3Q99909 AC113347.3-201ENST00000509113 148 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.59□□□□□ -1.83
SSX3Q99909 NARSP2-201ENST00000518524 679 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 MED28P5-201ENST00000528254 438 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 ZNF705CP-201ENST00000530515 889 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.59□□□□□ -1.83
SSX3Q99909 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.59□□□□□ -1.83
SSX3Q99909 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.59□□□□□ -1.83
SSX3Q99909 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.59□□□□□ -1.83
SSX3Q99909 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.59□□□□□ -1.83
SSX3Q99909 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.59□□□□□ -1.83
SSX3Q99909 VN1R83P-201ENST00000595685 445 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 AL160237.3-201ENST00000604114 1013 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 DPRXP5-201ENST00000604662 539 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.59□□□□□ -1.83
SSX3Q99909 AC090425.2-201ENST00000608818 501 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 AL138478.1-201ENST00000612252 832 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 AL731566.2-201ENST00000618971 317 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 AL121895.2-201ENST00000619558 447 ntBASIC3.59□□□□□ -1.83
SSX3Q99909 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.59□□□□□ -1.83
SSX3Q99909 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SSX3Q99909 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
SSX3Q99909 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
SSX3Q99909 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SSX3Q99909 AC139769.1-204ENST00000472297 1931 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 NXPH1-205ENST00000602349 1953 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SSX3Q99909 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SSX3Q99909 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SSX3Q99909 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX3Q99909 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX3Q99909 AP000567.1-201ENST00000406413 156 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 MTCO2P8-201ENST00000412213 658 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX3Q99909 USP12PY-201ENST00000427677 1064 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.58□□□□□ -1.84
SSX3Q99909 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX3Q99909 USP9YP22-201ENST00000438971 294 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.58□□□□□ -1.84
SSX3Q99909 RPL7P52-201ENST00000449200 742 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 HMGB3P22-202ENST00000451823 572 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 HMGB1P15-201ENST00000453854 435 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 TRBV26-201ENST00000456572 344 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 DUXAP8-207ENST00000456786 622 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 AC079804.1-201ENST00000461922 436 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 RN7SL98P-201ENST00000462271 300 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 RN7SL303P-201ENST00000469773 251 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX3Q99909 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.58□□□□□ -1.84
SSX3Q99909 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX3Q99909 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX3Q99909 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX3Q99909 MTCYBP37-201ENST00000510642 1133 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.58□□□□□ -1.84
SSX3Q99909 IGKV2-23-201ENST00000518729 323 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.58□□□□□ -1.84
SSX3Q99909 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms