Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NOTCH4Q99466 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NOTCH4Q99466 RNU6-553P-201ENST00000364047 96 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NOTCH4Q99466 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 VN1R8P-201ENST00000407739 893 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
NOTCH4Q99466 MTND1P30-201ENST00000441241 901 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AL592447.1-201ENST00000447592 540 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 RNA5SP103-201ENST00000459503 118 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC108022.1-201ENST00000493466 478 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 HSPE1P23-201ENST00000509838 286 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 HIGD1AP10-201ENST00000527837 282 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 AP000916.1-201ENST00000533869 835 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 GLYCAM1-201ENST00000546596 285 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 HSPE1P5-201ENST00000561489 272 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC022968.1-201ENST00000567372 442 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 RPL23AP87-202ENST00000573039 466 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC096553.1-201ENST00000605169 829 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC128687.1-201ENST00000605304 619 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC091965.4-201ENST00000607691 587 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC138932.5-201ENST00000617759 563 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC022509.4-201ENST00000621404 572 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NOTCH4Q99466 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NOTCH4Q99466 AL078595.2-201ENST00000605309 1780 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NOTCH4Q99466 MCTS2P-201ENST00000394552 546 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 ETF1P3-201ENST00000430422 1160 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 MTND3P21-201ENST00000433774 331 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 AC098614.3-201ENST00000438957 440 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 ELOCP10-201ENST00000440624 327 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 RAB28P3-201ENST00000448325 597 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 BUD31P2-201ENST00000449374 300 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 CFTRP1-201ENST00000456646 183 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 AC016687.1-201ENST00000482574 353 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 AC023050.1-201ENST00000498198 304 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 PRDX4P1-201ENST00000507189 574 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 AC010285.3-201ENST00000511668 676 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 DEFB130C-202ENST00000530001 230 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 RPL21P7-201ENST00000557463 483 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 AC084757.1-201ENST00000559987 490 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 ELOCP34-201ENST00000604436 327 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 AL592221.1-201ENST00000605266 382 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 AC010678.1-201ENST00000614118 713 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 AC009878.1-201ENST00000621819 340 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 AF001550.2-201ENST00000636643 217 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NOTCH4Q99466 MTND4P16-201ENST00000466108 1367 ntBASIC4.1□□□□□ -1.75
NOTCH4Q99466 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NOTCH4Q99466 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NOTCH4Q99466 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NOTCH4Q99466 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
NOTCH4Q99466 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NOTCH4Q99466 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
NOTCH4Q99466 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NOTCH4Q99466 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NOTCH4Q99466 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NOTCH4Q99466 AC024560.2-201ENST00000507981 1497 ntBASIC4.09□□□□□ -1.75
NOTCH4Q99466 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NOTCH4Q99466 HMGB1P10-201ENST00000395823 563 ntBASIC4.09□□□□□ -1.75
NOTCH4Q99466 PEX12P1-201ENST00000400284 1048 ntBASIC4.09□□□□□ -1.75
NOTCH4Q99466 SNORA57.3-201ENST00000411095 141 ntBASIC4.09□□□□□ -1.75
NOTCH4Q99466 RN7SKP142-201ENST00000411236 328 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms