Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC104687.2-201ENST00000604442 342 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC087783.2-201ENST00000605070 562 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 EIF3FP1-201ENST00000613970 806 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 MIR6758-201ENST00000620653 63 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC091905.4-201ENST00000623432 202 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC090229.1-201ENST00000590983 1609 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC007529.1-201ENST00000418574 2178 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC116158.1-201ENST00000560231 2129 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 MTCO1P9-201ENST00000505577 1534 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 Y_RNA.138-201ENST00000363462 102 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 RNA5SP479-201ENST00000364858 117 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 RNU6-769P-201ENST00000384407 104 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 MIR600-201ENST00000385007 98 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AL353678.1-201ENST00000422735 741 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 RPL35AP12-201ENST00000425362 338 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC073465.2-201ENST00000440938 498 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC006480.1-201ENST00000449887 378 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC233279.1-201ENST00000455300 423 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 RPL7AP28-201ENST00000464513 571 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC034236.1-201ENST00000469891 373 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 RPL7P42-201ENST00000481005 679 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 SCARNA20.4-201ENST00000516969 131 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 RNU6-87P-201ENST00000607561 108 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 RNU6-84P-201ENST00000607737 102 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AP006248.2-201ENST00000623309 592 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 DDX18P4-201ENST00000511690 1966 ntBASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 AL138820.1-201ENST00000617901 5305 ntBASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 LINC00561-201ENST00000565815 2738 ntBASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 MTND4P27-201ENST00000450813 1354 ntBASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 AC025125.1-201ENST00000624743 1922 ntBASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 AC100757.1-201ENST00000616872 1835 ntBASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 SNORA32.2-201ENST00000384049 122 ntBASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 RNA5SP87-201ENST00000384155 118 ntBASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 RPS20P2-201ENST00000402520 389 ntBASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 RNU2-8P-201ENST00000410727 190 ntBASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 RPL12P9-201ENST00000412942 488 ntBASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 AL592293.2-201ENST00000422292 996 ntBASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 EI24P4-201ENST00000423683 1078 ntBASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.98□□□□□ -1.45
SYNGAP1Q96PV0 MRPL50P4-201ENST00000446432 475 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms