Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.29□□□□□ -1.88
COL21A1Q96P44 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.29□□□□□ -1.88
COL21A1Q96P44 RN7SKP96-201ENST00000516948 297 ntBASIC3.29□□□□□ -1.88
COL21A1Q96P44 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.29□□□□□ -1.88
COL21A1Q96P44 AC026403.1-201ENST00000518938 295 ntBASIC3.29□□□□□ -1.88
COL21A1Q96P44 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.29□□□□□ -1.88
COL21A1Q96P44 AC026333.2-201ENST00000542164 106 ntBASIC3.29□□□□□ -1.88
COL21A1Q96P44 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.29□□□□□ -1.88
COL21A1Q96P44 AC125494.3-201ENST00000602759 455 ntBASIC3.29□□□□□ -1.88
COL21A1Q96P44 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.29□□□□□ -1.88
COL21A1Q96P44 AC110801.1-201ENST00000623590 212 ntBASIC3.29□□□□□ -1.88
COL21A1Q96P44 AC009093.8-201ENST00000641769 292 ntBASIC3.29□□□□□ -1.88
COL21A1Q96P44 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
COL21A1Q96P44 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL21A1Q96P44 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL21A1Q96P44 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL21A1Q96P44 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL21A1Q96P44 AC119744.1-201ENST00000454746 1715 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL21A1Q96P44 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
COL21A1Q96P44 SNORA73.2-201ENST00000364946 201 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 RNU6-805P-201ENST00000365643 106 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.28□□□□□ -1.88
COL21A1Q96P44 HMGB3P18-201ENST00000406327 590 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 SYF2P2-201ENST00000417620 583 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.28□□□□□ -1.88
COL21A1Q96P44 AC092832.1-201ENST00000422934 400 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 GLRXP1-201ENST00000423261 334 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.28□□□□□ -1.88
COL21A1Q96P44 CYCSP4-201ENST00000429682 331 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.28□□□□□ -1.88
COL21A1Q96P44 ZFAND6P1-201ENST00000434138 605 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.28□□□□□ -1.88
COL21A1Q96P44 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
COL21A1Q96P44 AL357552.1-201ENST00000445254 415 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.28□□□□□ -1.88
COL21A1Q96P44 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.28□□□□□ -1.88
COL21A1Q96P44 RPL29P29-201ENST00000448725 423 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 AL513343.1-201ENST00000451818 792 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 RPL12P26-201ENST00000452430 487 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 CFTRP1-201ENST00000456646 183 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 RPL9P32-201ENST00000464118 620 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 RN7SL594P-201ENST00000470590 287 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 AC023598.1-201ENST00000472521 361 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL21A1Q96P44 AC078785.3-201ENST00000476607 425 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 AC106707.2-201ENST00000484182 374 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 AC005726.1-201ENST00000494679 427 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 AP001086.1-201ENST00000494882 321 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.28□□□□□ -1.88
COL21A1Q96P44 TXNP6-201ENST00000510190 310 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 FABP5P12-201ENST00000515543 389 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 Vault.1-201ENST00000516474 102 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 RN7SKP289-201ENST00000517244 295 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.28□□□□□ -1.88
COL21A1Q96P44 AC093014.1-201ENST00000548926 724 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 AC004024.1-201ENST00000549244 247 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.28□□□□□ -1.88
COL21A1Q96P44 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.28□□□□□ -1.88
COL21A1Q96P44 MIR4298-201ENST00000584380 73 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 AC008507.1-201ENST00000587506 734 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 AC112503.1-201ENST00000608436 391 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.28□□□□□ -1.88
COL21A1Q96P44 MIR7851-201ENST00000610611 160 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 MIR1264-201ENST00000616374 69 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.28□□□□□ -1.88
COL21A1Q96P44 U6.98-201ENST00000637157 84 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
COL21A1Q96P44 SEC63P2-201ENST00000503863 1939 ntBASIC3.28□□□□□ -1.88
COL21A1Q96P44 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL21A1Q96P44 DCAF13P1-201ENST00000495256 1330 ntBASIC3.27□□□□□ -1.89
COL21A1Q96P44 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 RN7SKP53-201ENST00000411337 315 ntBASIC3.27□□□□□ -1.89
COL21A1Q96P44 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL21A1Q96P44 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 HSPD1P21-201ENST00000436541 245 ntBASIC3.27□□□□□ -1.89
COL21A1Q96P44 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL21A1Q96P44 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 HMGB3P30-201ENST00000457863 606 ntBASIC3.27□□□□□ -1.89
COL21A1Q96P44 AC091564.1-201ENST00000464563 479 ntBASIC3.27□□□□□ -1.89
COL21A1Q96P44 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 AP000563.1-201ENST00000490865 758 ntBASIC3.27□□□□□ -1.89
COL21A1Q96P44 SETP14-201ENST00000497538 873 ntBASIC3.27□□□□□ -1.89
COL21A1Q96P44 DSTNP2-201ENST00000504533 515 ntBASIC3.27□□□□□ -1.89
COL21A1Q96P44 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 AC023141.12-201ENST00000512399 199 ntBASIC3.27□□□□□ -1.89
COL21A1Q96P44 RNU6-362P-201ENST00000516736 90 ntBASIC3.27□□□□□ -1.89
COL21A1Q96P44 AC093331.1-201ENST00000521474 169 ntBASIC3.27□□□□□ -1.89
COL21A1Q96P44 AC006518.1-201ENST00000541449 943 ntBASIC3.27□□□□□ -1.89
COL21A1Q96P44 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms