Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RN7SKP213-201ENST00000410746 298 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 RNU4-14P-201ENST00000410858 122 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 AC234782.4-201ENST00000417646 1048 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 RBMY2QP-201ENST00000429799 1147 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 SNRPEP7-201ENST00000438350 220 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 AC007547.1-201ENST00000462177 490 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 RPL7AP6-201ENST00000477943 801 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 RPS27P23-201ENST00000487608 251 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 AC093303.1-201ENST00000514549 295 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 RNU6-941P-201ENST00000516346 108 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 PMS2P3-207ENST00000529061 717 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 POLR2KP1-201ENST00000553226 168 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 AL161670.1-201ENST00000554348 137 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 HMGB1P6-201ENST00000569046 646 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 AC099489.2-201ENST00000574976 260 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 RPL26P30-202ENST00000602923 645 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 AL022345.1-201ENST00000607292 135 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 AC005014.2-201ENST00000607795 599 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 AC243773.3-201ENST00000613270 256 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 AC109583.2-201ENST00000617367 129 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 AC068870.2-201ENST00000620635 389 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 AC022418.1-201ENST00000624118 445 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 MAPK10-328ENST00000641553 4009 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 OR9K1P-202ENST00000641111 3217 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 OR1S2-201ENST00000302592 978 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 RNU5E-1-201ENST00000362477 120 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 Y_RNA.47-201ENST00000362697 108 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 Y_RNA.187-201ENST00000363918 113 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 AC117470.1-201ENST00000381974 330 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 RNU1-106P-201ENST00000384382 164 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 RNU6-1026P-201ENST00000384465 108 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 MRPL42P2-201ENST00000403169 426 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 MIR548I3-201ENST00000408378 149 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 MIR548I1-201ENST00000408810 149 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 TMEM183AP1-205ENST00000432739 290 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 AL049734.2-201ENST00000441066 616 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 AL935212.3-201ENST00000450729 284 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 Y_RNA.635-201ENST00000459041 101 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 RPS18P6-201ENST00000476880 458 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 MTCO1P29-201ENST00000496868 288 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 TTC39CP1-201ENST00000512513 755 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 AC022616.6-201ENST00000520479 119 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 HMGB1P40-201ENST00000525121 540 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 AC137627.1-201ENST00000545761 289 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 BNIP3P6-201ENST00000549284 499 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 MIR4680-201ENST00000580906 66 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 RN7SL708P-201ENST00000580952 299 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 MIR548Y-201ENST00000582739 110 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 APOOP1-201ENST00000604695 592 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 AC090510.2-201ENST00000617465 629 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 AL354950.2-201ENST00000617939 290 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms