Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 ELOCP6-201ENST00000429066 328 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 UBE2V2P1-201ENST00000434717 398 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 ATP5C1P1-201ENST00000441945 895 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 RPL21P23-201ENST00000446654 460 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 ELOCP12-201ENST00000458706 328 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 AC005726.1-201ENST00000494679 427 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 OR4A2P-201ENST00000527276 913 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 OR5B10P-201ENST00000532869 642 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 MAGOH2P-202ENST00000584384 429 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 AC006116.7-201ENST00000590141 756 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 AC012468.1-201ENST00000604888 430 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 MIR4278-201ENST00000636094 69 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 AC244258.1-201ENST00000637553 1071 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 AL672296.1-201ENST00000427780 2158 ntBASIC3.55□□□□□ -1.84
CCDC112Q8NEF3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 AC108206.1-201ENST00000570186 4159 ntBASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 MTND5P7-201ENST00000413558 1798 ntBASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 RNF6P1-201ENST00000444889 1784 ntBASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 AC119744.1-201ENST00000454746 1715 ntBASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 RPL31P45-201ENST00000419532 356 ntBASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 AC073063.1-201ENST00000434352 607 ntBASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 AL353898.1-201ENST00000444055 238 ntBASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 OR6C72P-201ENST00000451403 892 ntBASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 AL358832.1-201ENST00000497800 389 ntBASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 APOOP4-201ENST00000513530 597 ntBASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 RNU2-58P-201ENST00000516403 183 ntBASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 AL160281.1-201ENST00000605307 311 ntBASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 AC015802.5-201ENST00000607478 399 ntBASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 AC006065.5-201ENST00000623427 349 ntBASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC112Q8NEF3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 AC096656.1-201ENST00000623826 1364 ntBASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 AC004987.3-201ENST00000413879 771 ntBASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 CYCSP43-201ENST00000438233 310 ntBASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 RPL5P23-201ENST00000496040 868 ntBASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 KATNBL1P4-201ENST00000503545 918 ntBASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 AC026427.2-201ENST00000506228 536 ntBASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 AL354950.1-201ENST00000614150 568 ntBASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 MIR7975-201ENST00000619350 68 ntBASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 AC009950.2-201ENST00000636548 183 ntBASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CCDC112Q8NEF3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
CCDC112Q8NEF3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 AL390023.1-201ENST00000428836 262 ntBASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 AL159987.2-201ENST00000432754 307 ntBASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 MTCYBP29-201ENST00000436327 1006 ntBASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 RPS12P18-201ENST00000442381 270 ntBASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 RPL37P6-202ENST00000464216 403 ntBASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 RN7SL601P-201ENST00000471221 293 ntBASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 RNU6-319P-201ENST00000516025 108 ntBASIC3.52□□□□□ -1.85
CCDC112Q8NEF3 RN7SKP43-201ENST00000516173 320 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms