Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AL031775.1-201ENST00000607014 887 ntBASIC4.08□□□□□ -1.76
CLIP4Q8N3C7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.08□□□□□ -1.76
CLIP4Q8N3C7 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CLIP4Q8N3C7 AL590240.3-201ENST00000621416 943 ntBASIC4.08□□□□□ -1.76
CLIP4Q8N3C7 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CLIP4Q8N3C7 AC092162.3-201ENST00000624511 1624 ntBASIC4.08□□□□□ -1.76
CLIP4Q8N3C7 AC092192.1-201ENST00000633154 1018 ntBASIC4.08□□□□□ -1.76
CLIP4Q8N3C7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.08□□□□□ -1.76
CLIP4Q8N3C7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AL356489.2-201ENST00000566968 3528 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AC107027.3-201ENST00000565095 3473 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AL512646.1-201ENST00000269395 1077 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 RNU1-15P-201ENST00000353977 144 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 SUGT1P1-201ENST00000379514 476 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 CYCSP45-201ENST00000402289 315 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AL139098.1-201ENST00000407291 389 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 RNU2-65P-201ENST00000410162 185 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 PGBD4P8-201ENST00000412993 562 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AF274854.1-201ENST00000413236 615 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 UBTFL3-201ENST00000418934 1024 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AC009965.2-201ENST00000425328 970 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 PRELID3BP10-201ENST00000431957 584 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AC004865.1-201ENST00000442276 1003 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 USP9YP10-201ENST00000454868 628 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AC006511.1-201ENST00000470614 315 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 UBTFL6-201ENST00000477929 1024 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AC109486.1-201ENST00000486833 374 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 RPL7P38-201ENST00000488396 739 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 UBA52P3-201ENST00000491303 382 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AC004069.2-201ENST00000505438 1114 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AF213884.2-201ENST00000510417 903 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 USP9YP5-201ENST00000511770 630 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AC022447.1-201ENST00000515358 464 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AP006289.1-201ENST00000538089 277 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 OR7K1P-201ENST00000546439 926 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 TRAV15-201ENST00000556680 249 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 ZNF415P1-201ENST00000582279 1166 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AC020914.4-201ENST00000597690 277 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AC233309.1-201ENST00000619522 751 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 MTND5P29-201ENST00000458676 1807 ntBASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.07□□□□□ -1.76
CLIP4Q8N3C7 AC134882.1-201ENST00000603738 1676 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AL445437.1-201ENST00000623157 3087 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AL356473.1-201ENST00000406203 1408 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 SNORA58B-201ENST00000364259 136 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AL663109.1-201ENST00000411498 844 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 USP9YP33-201ENST00000412220 421 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AL136133.1-201ENST00000413694 376 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AL139095.3-201ENST00000419672 1203 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms