Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 ZNF826P-207ENST00000622273 1910 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 SNORA70.2-201ENST00000364506 135 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 SNORA11C-201ENST00000408532 129 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 RNU6-628P-201ENST00000410675 107 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AC233982.1-201ENST00000451247 436 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 BX276092.4-201ENST00000452056 248 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 U3.44-201ENST00000458938 192 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AL133162.1-201ENST00000463228 453 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AC092754.2-201ENST00000463506 460 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AC015724.1-201ENST00000478577 156 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AC010460.1-201ENST00000507087 466 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AC104108.1-201ENST00000509930 412 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 RN7SKP289-201ENST00000517244 295 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 OR6C73P-201ENST00000546432 358 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 SERPINE4P-201ENST00000554978 281 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AC245100.7-201ENST00000609678 442 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AC069209.1-201ENST00000619282 651 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AC006213.5-201ENST00000619673 288 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AC112200.1-201ENST00000625015 234 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 FRG1CP-201ENST00000358464 769 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 MIR372-201ENST00000362225 67 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 SNORA73.2-201ENST00000364946 201 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 AL356968.1-201ENST00000416622 474 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 AC245291.1-201ENST00000419501 328 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 AL662791.1-201ENST00000441992 928 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 RPL21P89-201ENST00000444021 467 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 MTND1P33-201ENST00000446251 917 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 RPL21P47-201ENST00000483696 477 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 RPL31P13-201ENST00000484151 370 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 NCOR1P1-202ENST00000486162 291 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 MTND3P24-201ENST00000506306 329 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 AC093853.1-201ENST00000515689 483 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 RN7SKP244-201ENST00000516513 307 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 SNORA64.4-201ENST00000516632 81 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 AP000916.1-201ENST00000533869 835 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 AC008687.2-201ENST00000597865 520 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 AC091488.1-201ENST00000604239 660 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 AC092628.2-201ENST00000622492 339 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 AC097460.3-201ENST00000623099 442 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 AC010733.2-201ENST00000589496 5702 ntBASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
NUDCD3Q8IVD9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms