Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.21□□□□□ -1.58
ATG4DQ86TL0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.21□□□□□ -1.58
ATG4DQ86TL0 OR52H1-202ENST00000641796 1061 ntBASIC5.21□□□□□ -1.58
ATG4DQ86TL0 AC079776.5-201ENST00000641920 211 ntBASIC5.21□□□□□ -1.58
ATG4DQ86TL0 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4DQ86TL0 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4DQ86TL0 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4DQ86TL0 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4DQ86TL0 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
ATG4DQ86TL0 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.21□□□□□ -1.58
ATG4DQ86TL0 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4DQ86TL0 AL034546.1-201ENST00000623740 3693 ntBASIC5.21□□□□□ -1.58
ATG4DQ86TL0 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4DQ86TL0 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.21□□□□□ -1.58
ATG4DQ86TL0 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 NLRP3P1-201ENST00000622303 1785 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 RNU6-1115P-201ENST00000362490 106 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 RNU6-251P-201ENST00000363235 104 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 RNU6-522P-201ENST00000364497 107 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 RNU6-99P-201ENST00000364721 107 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 RN7SKP292-201ENST00000365522 317 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 Y_RNA.512-201ENST00000384518 102 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 Y_RNA.556-201ENST00000384677 113 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 RPL31P52-201ENST00000407532 367 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 DPH3P2-201ENST00000422618 250 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 AC018865.2-201ENST00000423631 129 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 AC009965.2-201ENST00000425328 970 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 NRBF2P3-201ENST00000432731 865 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 HMGB1P12-201ENST00000438594 598 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 DDX3P2-201ENST00000446138 111 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 RPL21P23-201ENST00000446654 460 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 RNU7-66P-201ENST00000459469 62 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 RN7SL570P-201ENST00000484405 292 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 PPIAP19-201ENST00000486414 492 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 RNA5SP92-201ENST00000516437 110 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 RNU6-1213P-201ENST00000517075 94 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 AL592436.1-201ENST00000605135 558 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 AC018462.2-201ENST00000605375 395 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 AC100812.1-201ENST00000607622 580 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 AC015712.7-201ENST00000615211 635 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 AC007546.1-201ENST00000619452 559 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 CR381572.1-201ENST00000625098 102 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4DQ86TL0 API5P2-201ENST00000397055 1498 ntBASIC5.2□□□□□ -1.58
ATG4DQ86TL0 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
ATG4DQ86TL0 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4DQ86TL0 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
ATG4DQ86TL0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
ATG4DQ86TL0 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.19□□□□□ -1.58
ATG4DQ86TL0 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
ATG4DQ86TL0 PNPT1P2-201ENST00000456768 2050 ntBASIC5.19□□□□□ -1.58
ATG4DQ86TL0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4DQ86TL0 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.19□□□□□ -1.58
ATG4DQ86TL0 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4DQ86TL0 WDR95P-201ENST00000425638 1542 ntBASIC5.19□□□□□ -1.58
ATG4DQ86TL0 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4DQ86TL0 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
ATG4DQ86TL0 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4DQ86TL0 AL159987.1-201ENST00000347911 293 ntBASIC5.19□□□□□ -1.58
ATG4DQ86TL0 RNY4P16-201ENST00000364768 94 ntBASIC5.19□□□□□ -1.58
ATG4DQ86TL0 RN7SKP81-201ENST00000365603 331 ntBASIC5.19□□□□□ -1.58
ATG4DQ86TL0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4DQ86TL0 MTCO2P33-201ENST00000402100 465 ntBASIC5.19□□□□□ -1.58
ATG4DQ86TL0 RNU6-272P-201ENST00000411028 104 ntBASIC5.19□□□□□ -1.58
ATG4DQ86TL0 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.19□□□□□ -1.58
ATG4DQ86TL0 RPS15AP12-201ENST00000419498 388 ntBASIC5.19□□□□□ -1.58
ATG4DQ86TL0 AL035660.1-201ENST00000422041 222 ntBASIC5.19□□□□□ -1.58
ATG4DQ86TL0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms