Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.49□□□□□ -1.85
NIPAL3Q6P499 ZNF971P-201ENST00000562068 1249 ntBASIC3.49□□□□□ -1.85
NIPAL3Q6P499 SNORD39.3-201ENST00000584451 71 ntBASIC3.49□□□□□ -1.85
NIPAL3Q6P499 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.49□□□□□ -1.85
NIPAL3Q6P499 AL669831.4-202ENST00000590817 238 ntBASIC3.49□□□□□ -1.85
NIPAL3Q6P499 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.49□□□□□ -1.85
NIPAL3Q6P499 AC020910.2-201ENST00000603635 610 ntBASIC3.49□□□□□ -1.85
NIPAL3Q6P499 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.49□□□□□ -1.85
NIPAL3Q6P499 AP000238.1-201ENST00000608759 426 ntBASIC3.49□□□□□ -1.85
NIPAL3Q6P499 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.49□□□□□ -1.85
NIPAL3Q6P499 VN1R7P-201ENST00000619242 903 ntBASIC3.49□□□□□ -1.85
NIPAL3Q6P499 AC048347.1-201ENST00000624621 427 ntBASIC3.49□□□□□ -1.85
NIPAL3Q6P499 AC112200.1-201ENST00000625015 234 ntBASIC3.49□□□□□ -1.85
NIPAL3Q6P499 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.49□□□□□ -1.85
NIPAL3Q6P499 RNA5SP196-201ENST00000625967 102 ntBASIC3.49□□□□□ -1.85
NIPAL3Q6P499 USP8P1-201ENST00000494673 3183 ntBASIC3.49□□□□□ -1.85
NIPAL3Q6P499 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NIPAL3Q6P499 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NIPAL3Q6P499 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.49□□□□□ -1.85
NIPAL3Q6P499 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NIPAL3Q6P499 AC006504.1-201ENST00000562493 3666 ntBASIC3.49□□□□□ -1.85
NIPAL3Q6P499 AL592494.2-201ENST00000425455 1548 ntBASIC3.49□□□□□ -1.85
NIPAL3Q6P499 CR381670.1-201ENST00000624291 1693 ntBASIC3.49□□□□□ -1.85
NIPAL3Q6P499 FAM91A3P-201ENST00000456826 2544 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 OR4A15-201ENST00000314706 1035 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 RNU6-582P-201ENST00000362989 107 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 SNORD116-23-201ENST00000384645 92 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 MCTS2P-201ENST00000394552 546 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 HSPE1P26-201ENST00000405341 275 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 RNA5SP56-201ENST00000410277 118 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AC004022.1-201ENST00000447766 1066 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 TRBV26-201ENST00000456572 344 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 RPL5P24-201ENST00000463742 885 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AC022034.3-201ENST00000471393 478 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 RPS3AP6-201ENST00000484430 795 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 RPL23AP55-201ENST00000498163 452 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 OR5H5P-201ENST00000503164 928 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AC093801.2-201ENST00000503966 1050 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AC026414.1-201ENST00000504046 698 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 RNU6-885P-201ENST00000516607 104 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 ZNF705CP-201ENST00000530515 889 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 OR4C2P-201ENST00000530855 1064 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 OR8R1P-201ENST00000543943 764 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AC093519.1-201ENST00000566109 298 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AC090330.1-201ENST00000588646 764 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AL355812.1-201ENST00000603215 216 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 DPRXP5-201ENST00000604662 539 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 MIR6875-201ENST00000617506 72 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AC068724.3-201ENST00000625906 87 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 AL021368.2-201ENST00000606125 5352 ntBASIC3.48□□□□□ -1.85
NIPAL3Q6P499 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.48□□□□□ -1.85
NIPAL3Q6P499 DBF4P1-201ENST00000412976 1892 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AL133383.2-201ENST00000622958 2336 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 RNU6-839P-201ENST00000363347 108 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 RPL7P27-201ENST00000403775 720 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 PTP4A1P5-201ENST00000420305 455 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 HSFY1P1-201ENST00000423928 1178 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AL035410.1-201ENST00000427409 427 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 SKP1P1-201ENST00000438081 489 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms