Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 RNA5SP72-201ENST00000364442 117 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 MIR184-201ENST00000384962 84 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 DSTNP4-201ENST00000399472 474 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 AC068533.1-201ENST00000418542 415 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 NEK4P1-201ENST00000433383 879 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 AC073063.1-201ENST00000434352 607 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 NDUFB1P1-201ENST00000435191 180 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 HMGB1P12-201ENST00000438594 598 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 TXNP1-201ENST00000441872 371 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 AC004865.1-201ENST00000442276 1003 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 AC068135.1-201ENST00000446164 246 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 PRSS3P4-201ENST00000453323 162 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 NF1P3-201ENST00000457709 450 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 RPL7P49-201ENST00000471402 708 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 VN1R17P-201ENST00000472048 1090 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 HIGD1AP10-201ENST00000527837 282 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 AC092747.2-201ENST00000545069 983 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 MIR3690-201ENST00000580266 75 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 IGHV3-29-201ENST00000604817 344 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 XIST_intron.1-201ENST00000619444 68 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 AL357559.1-201ENST00000622228 274 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 PABPC1P7-201ENST00000413177 1513 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 AL021368.2-201ENST00000606125 5352 ntBASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.32□□□□□ -1.88
H3F3CQ6NXT2 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 CEP170P1-201ENST00000502249 4587 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 AC104446.1-201ENST00000613728 1321 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 RNU6-1243P-201ENST00000364028 107 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 SNORA51.12-201ENST00000384448 134 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 AP000567.1-201ENST00000406413 156 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 AC073264.1-201ENST00000411508 416 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 AC002075.2-201ENST00000425207 252 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 USP9YP31-201ENST00000431405 881 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 AL513175.1-201ENST00000431492 780 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 ZNF965P-201ENST00000432501 817 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 VDAC1P3-201ENST00000434069 851 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 YWHAZP8-201ENST00000436935 731 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 HMGB1P38-201ENST00000490557 577 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 WBP1LP4-201ENST00000505043 344 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 AC026784.1-201ENST00000507986 352 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 CIR1P1-201ENST00000524055 1133 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 SYF2P1-201ENST00000550658 413 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 AC023161.2-201ENST00000551218 780 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 TRAV15-201ENST00000556680 249 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 MIR3186-201ENST00000577404 85 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 AC091488.1-201ENST00000604239 660 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 AC006023.2-201ENST00000609916 167 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 AC090617.9-201ENST00000623751 147 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 MIR7153-201ENST00000637758 57 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 AL732372.2-225ENST00000642124 456 ntBASIC3.31□□□□□ -1.88
H3F3CQ6NXT2 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 MFSD8-236ENST00000641509 4050 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 MTCO1P12-201ENST00000414273 1543 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms