Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AC023128.2-201ENST00000420880 1223 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 ARL5AP4-201ENST00000430731 512 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AC108860.1-201ENST00000484521 383 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AL163540.1-201ENST00000485382 386 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 MIR4452-201ENST00000583004 71 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 SNORA71.1-201ENST00000364523 117 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 Y_RNA.274-201ENST00000364714 101 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 RPS24P13-201ENST00000442520 397 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AC111000.2-201ENST00000507775 550 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 RNU6-579P-201ENST00000516879 102 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AC022634.1-201ENST00000520765 532 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 SULT1C2P1-202ENST00000562418 459 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AC025034.2-201ENST00000623264 286 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AC092326.2-201ENST00000624772 1561 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AL356489.2-201ENST00000566968 3528 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AL691447.1-201ENST00000419456 387 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 HIGD1AP1-201ENST00000550979 275 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 RDM1-219ENST00000615378 542 ntTSL 3 BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC1.71□□□□□ -2.13
UBR4Q5T4S7 MOB1AP1-201ENST00000430903 535 ntBASIC1.71□□□□□ -2.13
UBR4Q5T4S7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC1.71□□□□□ -2.13
UBR4Q5T4S7 AC108078.1-201ENST00000508073 725 ntBASIC1.71□□□□□ -2.13
UBR4Q5T4S7 NIFKP8-201ENST00000560500 874 ntBASIC1.71□□□□□ -2.13
UBR4Q5T4S7 MAPK10-322ENST00000641485 4530 ntBASIC1.71□□□□□ -2.13
UBR4Q5T4S7 Z95331.1-201ENST00000623075 23112 ntBASIC1.71□□□□□ -2.14
UBR4Q5T4S7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 AC244517.1-201ENST00000606030 2086 ntBASIC1.71□□□□□ -2.14
UBR4Q5T4S7 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 AF127577.6-201ENST00000623352 2191 ntBASIC1.71□□□□□ -2.14
UBR4Q5T4S7 NCAPGP1-201ENST00000505112 1814 ntBASIC1.71□□□□□ -2.14
UBR4Q5T4S7 NPM1P37-201ENST00000403105 874 ntBASIC1.71□□□□□ -2.14
UBR4Q5T4S7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 GTF3AP5-201ENST00000442645 697 ntBASIC1.71□□□□□ -2.14
UBR4Q5T4S7 AC007954.1-201ENST00000554198 494 ntBASIC1.71□□□□□ -2.14
UBR4Q5T4S7 OR4H12P-201ENST00000556269 907 ntBASIC1.71□□□□□ -2.14
UBR4Q5T4S7 AC017002.4-201ENST00000604721 1525 ntBASIC1.71□□□□□ -2.14
UBR4Q5T4S7 RPS4XP5-202ENST00000449995 1334 ntBASIC1.71□□□□□ -2.14
UBR4Q5T4S7 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 AC073325.2-201ENST00000339545 159 ntBASIC1.71□□□□□ -2.14
UBR4Q5T4S7 OR10D4P-201ENST00000525892 951 ntBASIC1.71□□□□□ -2.14
UBR4Q5T4S7 VN1R80P-201ENST00000597126 338 ntBASIC1.71□□□□□ -2.14
UBR4Q5T4S7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 SETP9-201ENST00000423837 832 ntBASIC1.71□□□□□ -2.14
UBR4Q5T4S7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 snoU109.4-201ENST00000458953 143 ntBASIC1.71□□□□□ -2.14
UBR4Q5T4S7 AC008716.1-201ENST00000511084 513 ntBASIC1.71□□□□□ -2.14
UBR4Q5T4S7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 AC103810.8-201ENST00000607347 118 ntBASIC1.71□□□□□ -2.14
UBR4Q5T4S7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms