Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC087879.1-201ENST00000474343 374 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 SCARNA22-201ENST00000503991 125 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 BOLA3P3-201ENST00000505182 232 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 MTCO1P30-201ENST00000515244 580 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 MTND2P26-201ENST00000528255 1029 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 PDCL2P2-201ENST00000533651 189 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AP004242.1-201ENST00000533701 349 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 OR8R1P-201ENST00000543943 764 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 TRAV15-201ENST00000556680 249 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AC079171.1-201ENST00000568788 914 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 MIR3138-201ENST00000585238 82 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AL031281.1-201ENST00000604049 488 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 ARF4P1-201ENST00000605447 541 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AC090246.1-201ENST00000616499 426 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AL391684.1-202ENST00000641293 1636 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 OR56B2P-202ENST00000641377 2453 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC106871.1-201ENST00000568324 3102 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 RNA5SP22-201ENST00000365393 109 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 RNA5SP151-201ENST00000365632 117 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 MIR634-201ENST00000385208 97 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AL121978.1-201ENST00000402778 359 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 LAP3P1-201ENST00000403648 294 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 BTBD10P2-201ENST00000404779 676 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC062016.2-201ENST00000420950 676 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 RPL7AP25-201ENST00000423357 805 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AL050321.1-201ENST00000432363 400 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 NUTF2P3-201ENST00000448540 384 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC104978.1-201ENST00000449387 391 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 HMGN3P1-201ENST00000453847 193 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC079168.2-201ENST00000453977 416 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC010301.1-201ENST00000473936 355 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC090013.1-201ENST00000485147 480 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC109445.1-201ENST00000512356 383 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC026726.1-201ENST00000512859 601 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC015795.1-201ENST00000513669 327 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 RNY4P37-201ENST00000516225 96 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 RN7SKP31-201ENST00000516354 278 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC145350.1-201ENST00000567426 208 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 MTND6P33-201ENST00000571794 183 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AP002360.3-201ENST00000607673 710 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC009237.17-201ENST00000618111 748 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC092184.1-201ENST00000625042 715 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC019226.2-201ENST00000625973 424 ntBASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.72□□□□□ -1.81
PDLIM3Q53GG5 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms