Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 AL031595.2-201ENST00000624215 19071 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 AC092447.10-201ENST00000620607 1652 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 PCAT14-202ENST00000627127 3935 ntBASIC5.66□□□□□ -1.5
CCDC144BQ3MJ40 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 MAPK10-349ENST00000641767 3661 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 RNU5E-5P-201ENST00000365379 116 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 RNU6-769P-201ENST00000384407 104 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 AL663109.1-201ENST00000411498 844 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 MTCO3P41-201ENST00000414801 328 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 ZNF885P-201ENST00000420174 1098 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 AC005517.2-201ENST00000424673 553 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 AC068287.1-201ENST00000430283 295 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 ELOCP18-201ENST00000434209 337 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 AC096638.2-201ENST00000434965 711 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 ATP5C1P1-201ENST00000441945 895 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 PPIAP3-201ENST00000450588 505 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 AC010733.1-201ENST00000451515 401 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 AL445669.2-201ENST00000454425 421 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 snoU13.8-201ENST00000458890 104 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 FABP5P5-201ENST00000515537 406 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 MTND4LP18-201ENST00000526864 291 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 AC020910.3-201ENST00000603701 874 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 AP000254.1-201ENST00000609934 520 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 AC104073.3-201ENST00000610942 955 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 AC027807.2-201ENST00000616099 408 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 AP006248.2-201ENST00000623309 592 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 BMS1P21-201ENST00000634565 365 ntBASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CCDC144BQ3MJ40 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC144BQ3MJ40 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.65□□□□□ -1.51
CCDC144BQ3MJ40 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC144BQ3MJ40 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC144BQ3MJ40 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC144BQ3MJ40 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 AC008549.2-201ENST00000333482 706 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 RNU6-744P-201ENST00000365557 107 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 RNU6-1316P-201ENST00000384242 108 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 AC007899.1-201ENST00000412776 775 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 RPL21P108-201ENST00000413857 481 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 MTCYBP24-201ENST00000420387 1106 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 AC007742.1-201ENST00000425789 329 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 ELOCP26-201ENST00000436067 329 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 AC092641.1-201ENST00000440229 772 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 AC092473.1-201ENST00000441098 221 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 OR1H1P-201ENST00000448731 937 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 RPL7P52-201ENST00000449200 742 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 RPL5P32-201ENST00000454085 879 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 AC011005.3-201ENST00000491624 395 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms