Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC128657.1-201ENST00000549459 145 ntBASIC6.6□□□□□ -1.35
CTC1Q2NKJ3 MIR5583-1-201ENST00000580941 59 ntBASIC6.6□□□□□ -1.35
CTC1Q2NKJ3 MIR1273E-201ENST00000581165 102 ntBASIC6.6□□□□□ -1.35
CTC1Q2NKJ3 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.6□□□□□ -1.35
CTC1Q2NKJ3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC6.6□□□□□ -1.35
CTC1Q2NKJ3 AC211433.2-201ENST00000608433 387 ntBASIC6.6□□□□□ -1.35
CTC1Q2NKJ3 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.6□□□□□ -1.35
CTC1Q2NKJ3 AL356274.1-201ENST00000617064 410 ntBASIC6.6□□□□□ -1.35
CTC1Q2NKJ3 AL159972.1-201ENST00000625150 448 ntBASIC6.6□□□□□ -1.35
CTC1Q2NKJ3 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CTC1Q2NKJ3 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.6□□□□□ -1.35
CTC1Q2NKJ3 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTC1Q2NKJ3 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.6□□□□□ -1.35
CTC1Q2NKJ3 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.6□□□□□ -1.35
CTC1Q2NKJ3 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CTC1Q2NKJ3 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTC1Q2NKJ3 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CTC1Q2NKJ3 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CTC1Q2NKJ3 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CTC1Q2NKJ3 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CTC1Q2NKJ3 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 AP000432.2-201ENST00000624164 2048 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 Y_RNA.122-201ENST00000363331 96 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 RN7SKP160-201ENST00000363804 340 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 RPL7P60-201ENST00000397636 735 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 RPS3AP2-201ENST00000407190 754 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 RN7SKP222-201ENST00000410651 315 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 AL596448.1-201ENST00000415024 392 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 E2F6P2-201ENST00000420708 748 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 MRPS18CP6-201ENST00000423587 223 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 OR3D1P-201ENST00000438288 955 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 SUMO2P3-201ENST00000438311 288 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 AC019185.1-201ENST00000442718 389 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 AL359955.2-201ENST00000445380 353 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 AL450996.1-201ENST00000445574 1202 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 AC008526.1-201ENST00000509149 338 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 AC116337.1-201ENST00000509680 687 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 AC022404.1-201ENST00000555320 273 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 COX6CP7-201ENST00000597056 208 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 AL121992.2-201ENST00000606262 256 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 DUSP12P1-201ENST00000612874 516 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 PABPC1P7-201ENST00000413177 1513 ntBASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.59□□□□□ -1.35
CTC1Q2NKJ3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CTC1Q2NKJ3 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.59□□□□□ -1.36
CTC1Q2NKJ3 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 MTCO1P24-201ENST00000515438 1558 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 Y_RNA.65-201ENST00000362846 100 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 SNORA62.1-201ENST00000364287 154 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 MIR454-201ENST00000390180 115 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 MIR548H3-201ENST00000408771 118 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 RNU2-28P-201ENST00000410457 189 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms