Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.03□□□□□ -1.92
USF2Q15853 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.03□□□□□ -1.92
USF2Q15853 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.03□□□□□ -1.92
USF2Q15853 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.03□□□□□ -1.92
USF2Q15853 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.03□□□□□ -1.92
USF2Q15853 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.03□□□□□ -1.92
USF2Q15853 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.03□□□□□ -1.92
USF2Q15853 AC125494.3-201ENST00000602759 455 ntBASIC3.03□□□□□ -1.92
USF2Q15853 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.03□□□□□ -1.92
USF2Q15853 BRDTP1-201ENST00000605735 677 ntBASIC3.03□□□□□ -1.92
USF2Q15853 AC005962.2-201ENST00000611427 652 ntBASIC3.03□□□□□ -1.92
USF2Q15853 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.03□□□□□ -1.92
USF2Q15853 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.03□□□□□ -1.92
USF2Q15853 AC117529.2-201ENST00000512159 2068 ntBASIC3.03□□□□□ -1.92
USF2Q15853 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.03□□□□□ -1.92
USF2Q15853 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.03□□□□□ -1.93
USF2Q15853 AC010733.2-201ENST00000589496 5702 ntBASIC3.02□□□□□ -1.93
USF2Q15853 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
USF2Q15853 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
USF2Q15853 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.02□□□□□ -1.93
USF2Q15853 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.02□□□□□ -1.93
USF2Q15853 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
USF2Q15853 RNU6-543P-201ENST00000362576 108 ntBASIC3.02□□□□□ -1.93
USF2Q15853 RNVU1-3-201ENST00000364313 161 ntBASIC3.02□□□□□ -1.93
USF2Q15853 RNA5SP130-201ENST00000364431 114 ntBASIC3.02□□□□□ -1.93
USF2Q15853 RNU6-339P-201ENST00000384310 107 ntBASIC3.02□□□□□ -1.93
USF2Q15853 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
USF2Q15853 RPL31P1-201ENST00000398116 372 ntBASIC3.02□□□□□ -1.93
USF2Q15853 AC092745.2-202ENST00000411880 369 ntBASIC3.02□□□□□ -1.93
USF2Q15853 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.02□□□□□ -1.93
USF2Q15853 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.02□□□□□ -1.93
USF2Q15853 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.02□□□□□ -1.93
USF2Q15853 SETP8-201ENST00000435341 628 ntBASIC3.02□□□□□ -1.93
USF2Q15853 TBCAP1-201ENST00000436520 327 ntBASIC3.02□□□□□ -1.93
USF2Q15853 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.02□□□□□ -1.93
USF2Q15853 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
USF2Q15853 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.02□□□□□ -1.93
USF2Q15853 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
USF2Q15853 RN7SL442P-201ENST00000473804 320 ntBASIC3.02□□□□□ -1.93
USF2Q15853 KLHL2P1-201ENST00000508691 521 ntBASIC3.02□□□□□ -1.93
USF2Q15853 MTCYBP37-201ENST00000510642 1133 ntBASIC3.02□□□□□ -1.93
USF2Q15853 RNA5SP179-201ENST00000517284 121 ntBASIC3.02□□□□□ -1.93
USF2Q15853 AC087369.1-201ENST00000520775 996 ntBASIC3.02□□□□□ -1.93
USF2Q15853 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.02□□□□□ -1.93
USF2Q15853 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
USF2Q15853 AC006518.1-201ENST00000541449 943 ntBASIC3.02□□□□□ -1.93
USF2Q15853 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.02□□□□□ -1.93
USF2Q15853 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.02□□□□□ -1.93
USF2Q15853 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.02□□□□□ -1.93
USF2Q15853 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.02□□□□□ -1.93
USF2Q15853 AC106791.2-201ENST00000604680 391 ntBASIC3.02□□□□□ -1.93
USF2Q15853 AC091167.4-201ENST00000605079 184 ntBASIC3.02□□□□□ -1.93
USF2Q15853 AC128687.1-201ENST00000605304 619 ntBASIC3.02□□□□□ -1.93
USF2Q15853 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.02□□□□□ -1.93
USF2Q15853 STMN1P1-201ENST00000617809 440 ntBASIC3.02□□□□□ -1.93
USF2Q15853 AL139089.1-201ENST00000620372 975 ntBASIC3.02□□□□□ -1.93
USF2Q15853 AC091046.2-201ENST00000620775 665 ntBASIC3.02□□□□□ -1.93
USF2Q15853 AC024595.1-201ENST00000623088 387 ntBASIC3.02□□□□□ -1.93
USF2Q15853 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
USF2Q15853 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
USF2Q15853 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
USF2Q15853 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
USF2Q15853 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
USF2Q15853 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
USF2Q15853 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
USF2Q15853 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
USF2Q15853 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.01□□□□□ -1.93
USF2Q15853 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
USF2Q15853 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
USF2Q15853 RNU6-989P-201ENST00000362756 107 ntBASIC3.01□□□□□ -1.93
USF2Q15853 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.01□□□□□ -1.93
USF2Q15853 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
USF2Q15853 AC068538.1-201ENST00000376856 336 ntBASIC3.01□□□□□ -1.93
USF2Q15853 AL391417.1-201ENST00000404100 426 ntBASIC3.01□□□□□ -1.93
USF2Q15853 RNU4-6P-201ENST00000410804 122 ntBASIC3.01□□□□□ -1.93
USF2Q15853 OR8G2P-201ENST00000412796 908 ntBASIC3.01□□□□□ -1.93
USF2Q15853 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.01□□□□□ -1.93
USF2Q15853 RPS7P15-201ENST00000415804 584 ntBASIC3.01□□□□□ -1.93
USF2Q15853 RPS3AP9-201ENST00000417027 792 ntBASIC3.01□□□□□ -1.93
USF2Q15853 SSXP9-201ENST00000417503 292 ntBASIC3.01□□□□□ -1.93
USF2Q15853 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
USF2Q15853 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.01□□□□□ -1.93
USF2Q15853 AL691449.1-201ENST00000426570 421 ntBASIC3.01□□□□□ -1.93
USF2Q15853 AC010881.1-201ENST00000433830 235 ntBASIC3.01□□□□□ -1.93
USF2Q15853 AC125238.1-201ENST00000448842 249 ntBASIC3.01□□□□□ -1.93
USF2Q15853 AC098824.1-201ENST00000453565 980 ntBASIC3.01□□□□□ -1.93
USF2Q15853 AL136126.1-201ENST00000473603 402 ntBASIC3.01□□□□□ -1.93
USF2Q15853 AC015724.1-201ENST00000478577 156 ntBASIC3.01□□□□□ -1.93
USF2Q15853 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.01□□□□□ -1.93
USF2Q15853 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.01□□□□□ -1.93
USF2Q15853 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
USF2Q15853 AC104057.1-201ENST00000515547 497 ntBASIC3.01□□□□□ -1.93
USF2Q15853 RNU6-488P-201ENST00000515918 99 ntBASIC3.01□□□□□ -1.93
USF2Q15853 SNORA31.1-201ENST00000515993 133 ntBASIC3.01□□□□□ -1.93
USF2Q15853 SNORA31.5-201ENST00000516190 133 ntBASIC3.01□□□□□ -1.93
USF2Q15853 SNORA31.9-201ENST00000516429 84 ntBASIC3.01□□□□□ -1.93
USF2Q15853 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
USF2Q15853 MRPL49P2-201ENST00000521066 465 ntBASIC3.01□□□□□ -1.93
USF2Q15853 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.01□□□□□ -1.93
USF2Q15853 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 210.5 ms