Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 SNORD66.1-201ENST00000391230 76 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AL590084.1-201ENST00000407885 387 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.76□□□□□ -1.81
SCN1BQ07699 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.76□□□□□ -1.81
SCN1BQ07699 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SCN1BQ07699 PSMA6P3-201ENST00000428242 164 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AC079780.1-201ENST00000428259 207 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AL360081.1-201ENST00000428299 555 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AC011742.1-201ENST00000431448 434 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.76□□□□□ -1.81
SCN1BQ07699 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.76□□□□□ -1.81
SCN1BQ07699 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.76□□□□□ -1.81
SCN1BQ07699 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.76□□□□□ -1.81
SCN1BQ07699 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.76□□□□□ -1.81
SCN1BQ07699 ARL2BPP10-201ENST00000446487 531 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.76□□□□□ -1.81
SCN1BQ07699 MTND2P19-201ENST00000449129 1012 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 USP9YP34-201ENST00000453983 808 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 ANP32BP2-201ENST00000454525 545 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 HMGN2P16-201ENST00000456802 261 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AC026410.2-201ENST00000460281 156 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 RN7SL610P-201ENST00000463845 291 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 RN7SL354P-201ENST00000469282 294 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AC011979.1-201ENST00000472300 483 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AL024509.2-201ENST00000493462 493 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AC106872.2-201ENST00000494303 480 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 UBE2V1P12-201ENST00000503954 474 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.76□□□□□ -1.81
SCN1BQ07699 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.76□□□□□ -1.81
SCN1BQ07699 NDUFB4P9-201ENST00000511646 388 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.76□□□□□ -1.81
SCN1BQ07699 SNORA70.14-201ENST00000516205 110 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AC104986.1-201ENST00000517978 436 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AC138701.1-201ENST00000524329 714 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.76□□□□□ -1.81
SCN1BQ07699 AP001781.1-201ENST00000530977 207 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AC005832.3-201ENST00000537929 631 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 HIGD1AP17-201ENST00000554576 276 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AC069061.3-201ENST00000582254 823 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 MIR4480-201ENST00000582492 71 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.76□□□□□ -1.81
SCN1BQ07699 MTND3P19-201ENST00000603825 345 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AL451044.1-201ENST00000604867 238 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AC022509.4-201ENST00000621404 572 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 AC091953.3-201ENST00000623220 236 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.76□□□□□ -1.81
SCN1BQ07699 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SCN1BQ07699 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SCN1BQ07699 MFSD8-242ENST00000641690 4199 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 HSPA8P1-201ENST00000425843 1833 ntBASIC3.76□□□□□ -1.81
SCN1BQ07699 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SCN1BQ07699 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.75□□□□□ -1.81
SCN1BQ07699 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SCN1BQ07699 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.75□□□□□ -1.81
SCN1BQ07699 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
SCN1BQ07699 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SCN1BQ07699 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SCN1BQ07699 RNU6-413P-201ENST00000384115 107 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 RNA5SP80-201ENST00000410475 111 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 AC068533.2-201ENST00000411872 306 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 MTATP6P20-201ENST00000414147 562 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 PTP4A1P5-201ENST00000420305 455 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.75□□□□□ -1.81
SCN1BQ07699 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.75□□□□□ -1.81
SCN1BQ07699 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.75□□□□□ -1.81
SCN1BQ07699 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.75□□□□□ -1.81
SCN1BQ07699 USP9YP31-201ENST00000431405 881 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 AL049745.1-201ENST00000433953 286 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SCN1BQ07699 HMGB1P12-201ENST00000438594 598 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 AC006466.1-201ENST00000438721 289 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 RPL23AP43-201ENST00000446445 471 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 OFD1P3Y-201ENST00000453312 783 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 RAD23BP3-201ENST00000454157 1152 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.75□□□□□ -1.81
SCN1BQ07699 snoU13.4-201ENST00000458916 104 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 snoU109.4-201ENST00000458953 143 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 AC087312.1-201ENST00000471411 480 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 MTCO3P35-201ENST00000485582 781 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 RPL23AP72-201ENST00000492447 435 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 SETP14-201ENST00000497538 873 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.75□□□□□ -1.81
SCN1BQ07699 UBE2CP3-201ENST00000502715 450 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 TRAV31-201ENST00000502780 342 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 HMGB1P28-201ENST00000507778 552 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.75□□□□□ -1.81
SCN1BQ07699 IGKV2-38-201ENST00000517443 247 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SCN1BQ07699 AC024224.1-201ENST00000538284 609 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 SYF2P1-201ENST00000550658 413 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.75□□□□□ -1.81
SCN1BQ07699 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.75□□□□□ -1.81
SCN1BQ07699 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.75□□□□□ -1.81
SCN1BQ07699 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.75□□□□□ -1.81
SCN1BQ07699 FAM25E-202ENST00000608562 189 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 AC064801.1-201ENST00000612025 407 ntBASIC3.75□□□□□ -1.81
SCN1BQ07699 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms