Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.06□□□□□ -2.08
PRKDCP78527 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.06□□□□□ -2.08
PRKDCP78527 PRDX3P4-201ENST00000470828 747 ntBASIC2.06□□□□□ -2.08
PRKDCP78527 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.06□□□□□ -2.08
PRKDCP78527 AP001025.2-201ENST00000490908 477 ntBASIC2.06□□□□□ -2.08
PRKDCP78527 AC113430.1-201ENST00000506872 718 ntBASIC2.06□□□□□ -2.08
PRKDCP78527 AC243972.3-201ENST00000539655 198 ntBASIC2.06□□□□□ -2.08
PRKDCP78527 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.06□□□□□ -2.08
PRKDCP78527 AL365400.2-201ENST00000605604 902 ntBASIC2.06□□□□□ -2.08
PRKDCP78527 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC2.06□□□□□ -2.08
PRKDCP78527 CTSLP2-204ENST00000629029 392 ntBASIC2.06□□□□□ -2.08
PRKDCP78527 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.06□□□□□ -2.08
PRKDCP78527 AC080128.1-201ENST00000474389 1917 ntBASIC2.06□□□□□ -2.08
PRKDCP78527 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PRKDCP78527 OR1S2-201ENST00000302592 978 ntBASIC2.06□□□□□ -2.08
PRKDCP78527 MIR27B-201ENST00000385129 97 ntBASIC2.06□□□□□ -2.08
PRKDCP78527 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.06□□□□□ -2.08
PRKDCP78527 AL162389.1-201ENST00000449233 177 ntBASIC2.06□□□□□ -2.08
PRKDCP78527 RPL23AP11-201ENST00000475260 469 ntBASIC2.06□□□□□ -2.08
PRKDCP78527 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.06□□□□□ -2.08
PRKDCP78527 NF1P10-201ENST00000613227 742 ntBASIC2.06□□□□□ -2.08
PRKDCP78527 AC103798.2-201ENST00000624292 632 ntBASIC2.06□□□□□ -2.08
PRKDCP78527 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC2.06□□□□□ -2.08
PRKDCP78527 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
PRKDCP78527 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
PRKDCP78527 AC096644.4-201ENST00000563417 2912 ntBASIC2.06□□□□□ -2.08
PRKDCP78527 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PRKDCP78527 Y_RNA.338-201ENST00000365320 114 ntBASIC2.06□□□□□ -2.08
PRKDCP78527 SNORA64-201ENST00000384674 134 ntBASIC2.06□□□□□ -2.08
PRKDCP78527 AL662791.1-201ENST00000441992 928 ntBASIC2.06□□□□□ -2.08
PRKDCP78527 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.06□□□□□ -2.08
PRKDCP78527 OR5H5P-201ENST00000503164 928 ntBASIC2.06□□□□□ -2.08
PRKDCP78527 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PRKDCP78527 BNIP3P38-201ENST00000601117 544 ntBASIC2.06□□□□□ -2.08
PRKDCP78527 AC007938.3-201ENST00000604965 623 ntBASIC2.06□□□□□ -2.08
PRKDCP78527 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.06□□□□□ -2.08
PRKDCP78527 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PRKDCP78527 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PRKDCP78527 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
PRKDCP78527 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC2.05□□□□□ -2.08
PRKDCP78527 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC2.05□□□□□ -2.08
PRKDCP78527 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.05□□□□□ -2.08
PRKDCP78527 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
PRKDCP78527 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.05□□□□□ -2.08
PRKDCP78527 Z98742.3-201ENST00000418637 326 ntBASIC2.05□□□□□ -2.08
PRKDCP78527 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC2.05□□□□□ -2.08
PRKDCP78527 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.05□□□□□ -2.08
PRKDCP78527 AC078817.1-201ENST00000492623 435 ntBASIC2.05□□□□□ -2.08
PRKDCP78527 AC107934.2-201ENST00000518653 310 ntBASIC2.05□□□□□ -2.08
PRKDCP78527 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.05□□□□□ -2.08
PRKDCP78527 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
PRKDCP78527 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
PRKDCP78527 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
PRKDCP78527 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
PRKDCP78527 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
PRKDCP78527 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC2.05□□□□□ -2.08
PRKDCP78527 MIR499A-201ENST00000384903 122 ntBASIC2.05□□□□□ -2.08
PRKDCP78527 ANP32BP2-201ENST00000454525 545 ntBASIC2.05□□□□□ -2.08
PRKDCP78527 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC2.05□□□□□ -2.08
PRKDCP78527 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.05□□□□□ -2.08
PRKDCP78527 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.05□□□□□ -2.08
PRKDCP78527 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.05□□□□□ -2.08
PRKDCP78527 ISCA1P3-201ENST00000577104 373 ntBASIC2.05□□□□□ -2.08
PRKDCP78527 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.05□□□□□ -2.08
PRKDCP78527 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.05□□□□□ -2.08
PRKDCP78527 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC2.05□□□□□ -2.08
PRKDCP78527 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
PRKDCP78527 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.05□□□□□ -2.08
PRKDCP78527 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC2.05□□□□□ -2.08
PRKDCP78527 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PRKDCP78527 AL138827.1-201ENST00000402666 306 ntBASIC2.05□□□□□ -2.08
PRKDCP78527 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.05□□□□□ -2.08
PRKDCP78527 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.05□□□□□ -2.08
PRKDCP78527 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC2.05□□□□□ -2.08
PRKDCP78527 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.05□□□□□ -2.08
PRKDCP78527 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC2.05□□□□□ -2.08
PRKDCP78527 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
PRKDCP78527 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
PRKDCP78527 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.04□□□□□ -2.08
PRKDCP78527 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
PRKDCP78527 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
PRKDCP78527 MIR26A1-201ENST00000362205 77 ntBASIC2.04□□□□□ -2.08
PRKDCP78527 HSPE1P8-201ENST00000406997 288 ntBASIC2.04□□□□□ -2.08
PRKDCP78527 MRPS31P2-201ENST00000451581 518 ntBASIC2.04□□□□□ -2.08
PRKDCP78527 RPL12P26-201ENST00000452430 487 ntBASIC2.04□□□□□ -2.08
PRKDCP78527 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
PRKDCP78527 AC090695.1-201ENST00000561269 1222 ntBASIC2.04□□□□□ -2.08
PRKDCP78527 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PRKDCP78527 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.04□□□□□ -2.08
PRKDCP78527 AC009237.17-201ENST00000618111 748 ntBASIC2.04□□□□□ -2.08
PRKDCP78527 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.04□□□□□ -2.08
PRKDCP78527 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PRKDCP78527 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC2.04□□□□□ -2.08
PRKDCP78527 AC006971.1-201ENST00000407916 4486 ntBASIC2.04□□□□□ -2.08
PRKDCP78527 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PRKDCP78527 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PRKDCP78527 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PRKDCP78527 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PRKDCP78527 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PRKDCP78527 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms