Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
COPAP53621 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COPAP53621 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
COPAP53621 Y_RNA.51-201ENST00000362725 102 ntBASIC4.73□□□□□ -1.65
COPAP53621 CYCSP45-201ENST00000402289 315 ntBASIC4.73□□□□□ -1.65
COPAP53621 HDGFP1-201ENST00000405943 252 ntBASIC4.73□□□□□ -1.65
COPAP53621 AL133384.1-201ENST00000412744 351 ntBASIC4.73□□□□□ -1.65
COPAP53621 MTCYBP38-201ENST00000417160 1123 ntBASIC4.73□□□□□ -1.65
COPAP53621 MTCO2P16-201ENST00000436962 677 ntBASIC4.73□□□□□ -1.65
COPAP53621 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.73□□□□□ -1.65
COPAP53621 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COPAP53621 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.73□□□□□ -1.65
COPAP53621 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.73□□□□□ -1.65
COPAP53621 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.73□□□□□ -1.65
COPAP53621 H2AFZP5-201ENST00000446960 382 ntBASIC4.73□□□□□ -1.65
COPAP53621 AL162591.2-201ENST00000449634 317 ntBASIC4.73□□□□□ -1.65
COPAP53621 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.73□□□□□ -1.65
COPAP53621 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.73□□□□□ -1.65
COPAP53621 AL672167.3-201ENST00000465951 960 ntBASIC4.73□□□□□ -1.65
COPAP53621 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.73□□□□□ -1.65
COPAP53621 RPL21P103-201ENST00000479921 488 ntBASIC4.73□□□□□ -1.65
COPAP53621 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.73□□□□□ -1.65
COPAP53621 RPS6P4-201ENST00000494693 758 ntBASIC4.73□□□□□ -1.65
COPAP53621 AC080014.1-201ENST00000496877 1201 ntBASIC4.73□□□□□ -1.65
COPAP53621 AC090071.1-201ENST00000507713 644 ntBASIC4.73□□□□□ -1.65
COPAP53621 STMN1P2-201ENST00000508435 439 ntBASIC4.73□□□□□ -1.65
COPAP53621 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.73□□□□□ -1.65
COPAP53621 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.73□□□□□ -1.65
COPAP53621 ZNF705CP-201ENST00000530515 889 ntBASIC4.73□□□□□ -1.65
COPAP53621 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.73□□□□□ -1.65
COPAP53621 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.73□□□□□ -1.65
COPAP53621 AC024909.2-201ENST00000553035 286 ntBASIC4.73□□□□□ -1.65
COPAP53621 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COPAP53621 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.73□□□□□ -1.65
COPAP53621 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.73□□□□□ -1.65
COPAP53621 AC136624.4-201ENST00000573044 370 ntBASIC4.73□□□□□ -1.65
COPAP53621 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.73□□□□□ -1.65
COPAP53621 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.73□□□□□ -1.65
COPAP53621 RN7SL176P-201ENST00000580352 264 ntBASIC4.73□□□□□ -1.65
COPAP53621 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.73□□□□□ -1.65
COPAP53621 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.73□□□□□ -1.65
COPAP53621 VN1R92P-201ENST00000598511 928 ntBASIC4.73□□□□□ -1.65
COPAP53621 AC008782.1-201ENST00000603386 430 ntBASIC4.73□□□□□ -1.65
COPAP53621 COX6CP4-201ENST00000605798 228 ntBASIC4.73□□□□□ -1.65
COPAP53621 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.73□□□□□ -1.65
COPAP53621 AL049536.1-201ENST00000625043 744 ntBASIC4.73□□□□□ -1.65
COPAP53621 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.73□□□□□ -1.65
COPAP53621 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COPAP53621 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COPAP53621 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COPAP53621 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.72□□□□□ -1.65
COPAP53621 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
COPAP53621 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COPAP53621 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.72□□□□□ -1.65
COPAP53621 RNU6-623P-201ENST00000363143 105 ntBASIC4.72□□□□□ -1.65
COPAP53621 RNU1-20P-201ENST00000363314 162 ntBASIC4.72□□□□□ -1.65
COPAP53621 RNU4-24P-201ENST00000364565 139 ntBASIC4.72□□□□□ -1.65
COPAP53621 AC093698.1-201ENST00000423843 571 ntBASIC4.72□□□□□ -1.65
COPAP53621 COX6CP15-201ENST00000426313 211 ntBASIC4.72□□□□□ -1.65
COPAP53621 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.72□□□□□ -1.65
COPAP53621 AC073335.1-201ENST00000427776 363 ntBASIC4.72□□□□□ -1.65
COPAP53621 AC008065.1-201ENST00000428525 348 ntBASIC4.72□□□□□ -1.65
COPAP53621 NPM1P34-201ENST00000428821 893 ntBASIC4.72□□□□□ -1.65
COPAP53621 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.72□□□□□ -1.65
COPAP53621 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.72□□□□□ -1.65
COPAP53621 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.72□□□□□ -1.65
COPAP53621 AC073587.1-201ENST00000447093 876 ntBASIC4.72□□□□□ -1.65
COPAP53621 RPL39P6-201ENST00000448289 150 ntBASIC4.72□□□□□ -1.65
COPAP53621 OR6C5P-201ENST00000452388 923 ntBASIC4.72□□□□□ -1.65
COPAP53621 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.72□□□□□ -1.65
COPAP53621 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.72□□□□□ -1.65
COPAP53621 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.72□□□□□ -1.65
COPAP53621 LTV1P1-201ENST00000510683 1237 ntBASIC4.72□□□□□ -1.65
COPAP53621 AC134698.5-201ENST00000519444 336 ntBASIC4.72□□□□□ -1.65
COPAP53621 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.72□□□□□ -1.65
COPAP53621 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.72□□□□□ -1.65
COPAP53621 AC239860.2-201ENST00000525886 270 ntBASIC4.72□□□□□ -1.65
COPAP53621 PTP4A1P6-201ENST00000531034 478 ntBASIC4.72□□□□□ -1.65
COPAP53621 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.72□□□□□ -1.65
COPAP53621 AC008127.2-201ENST00000549925 1075 ntBASIC4.72□□□□□ -1.65
COPAP53621 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.72□□□□□ -1.65
COPAP53621 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.72□□□□□ -1.65
COPAP53621 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.72□□□□□ -1.65
COPAP53621 AC069061.3-201ENST00000582254 823 ntBASIC4.72□□□□□ -1.65
COPAP53621 AL133338.2-201ENST00000604292 736 ntBASIC4.72□□□□□ -1.65
COPAP53621 AP003117.2-201ENST00000606010 545 ntBASIC4.72□□□□□ -1.65
COPAP53621 AC091979.2-201ENST00000607514 214 ntBASIC4.72□□□□□ -1.65
COPAP53621 AC105429.2-201ENST00000610567 517 ntBASIC4.72□□□□□ -1.65
COPAP53621 AL158196.1-201ENST00000616786 434 ntBASIC4.72□□□□□ -1.65
COPAP53621 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.72□□□□□ -1.65
COPAP53621 AC098679.4-201ENST00000624241 654 ntBASIC4.72□□□□□ -1.65
COPAP53621 U3.53-201ENST00000628922 216 ntBASIC4.72□□□□□ -1.65
COPAP53621 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.72□□□□□ -1.65
COPAP53621 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.72□□□□□ -1.65
COPAP53621 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.72□□□□□ -1.65
COPAP53621 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.72□□□□□ -1.65
COPAP53621 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.72□□□□□ -1.65
COPAP53621 ZNF137P-201ENST00000456718 1920 ntBASIC4.72□□□□□ -1.65
COPAP53621 EOGT-210ENST00000615922 1931 ntBASIC4.72□□□□□ -1.65
COPAP53621 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms