Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.35□□□□□ -1.71
CLCN3P51790 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.35□□□□□ -1.71
CLCN3P51790 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CLCN3P51790 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.35□□□□□ -1.71
CLCN3P51790 AC109471.1-201ENST00000511631 612 ntBASIC4.35□□□□□ -1.71
CLCN3P51790 AC093853.1-201ENST00000515689 483 ntBASIC4.35□□□□□ -1.71
CLCN3P51790 RNU6-202P-201ENST00000515998 96 ntBASIC4.35□□□□□ -1.71
CLCN3P51790 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.35□□□□□ -1.71
CLCN3P51790 AC087369.1-201ENST00000520775 996 ntBASIC4.35□□□□□ -1.71
CLCN3P51790 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.35□□□□□ -1.71
CLCN3P51790 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.35□□□□□ -1.71
CLCN3P51790 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.35□□□□□ -1.71
CLCN3P51790 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.35□□□□□ -1.71
CLCN3P51790 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.35□□□□□ -1.71
CLCN3P51790 AC068446.3-201ENST00000555285 382 ntBASIC4.35□□□□□ -1.71
CLCN3P51790 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.35□□□□□ -1.71
CLCN3P51790 AADACP1-206ENST00000561502 1193 ntBASIC4.35□□□□□ -1.71
CLCN3P51790 AC087499.8-201ENST00000578406 226 ntBASIC4.35□□□□□ -1.71
CLCN3P51790 AC090312.1-201ENST00000580637 348 ntBASIC4.35□□□□□ -1.71
CLCN3P51790 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.35□□□□□ -1.71
CLCN3P51790 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
CLCN3P51790 AC040904.1-201ENST00000590850 223 ntBASIC4.35□□□□□ -1.71
CLCN3P51790 AL354760.1-201ENST00000608357 643 ntBASIC4.35□□□□□ -1.71
CLCN3P51790 AC084782.3-201ENST00000612282 578 ntBASIC4.35□□□□□ -1.71
CLCN3P51790 AL121772.2-201ENST00000614331 297 ntBASIC4.35□□□□□ -1.71
CLCN3P51790 AC013470.4-201ENST00000619978 986 ntBASIC4.35□□□□□ -1.71
CLCN3P51790 AP003399.1-201ENST00000637534 361 ntBASIC4.35□□□□□ -1.71
CLCN3P51790 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CLCN3P51790 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.35□□□□□ -1.71
CLCN3P51790 AL592437.2-201ENST00000421655 2434 ntBASIC4.35□□□□□ -1.71
CLCN3P51790 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLCN3P51790 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.35□□□□□ -1.71
CLCN3P51790 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLCN3P51790 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLCN3P51790 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLCN3P51790 AC016716.1-201ENST00000265882 708 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 OR4A15-201ENST00000314706 1035 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 RNU1-108P-201ENST00000362556 161 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 RNA5SP391-201ENST00000363456 119 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 SUGT1P1-201ENST00000379514 476 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 RNU6-1300P-201ENST00000391046 108 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 RPS24P12-201ENST00000402084 394 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 RN7SKP156-201ENST00000410308 342 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.34□□□□□ -1.71
CLCN3P51790 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.34□□□□□ -1.71
CLCN3P51790 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.34□□□□□ -1.71
CLCN3P51790 IFNNP1-201ENST00000429219 553 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.34□□□□□ -1.71
CLCN3P51790 AC018644.1-201ENST00000429934 551 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 USP9YP31-201ENST00000431405 881 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 AC010881.1-201ENST00000433830 235 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 AL450263.2-201ENST00000439400 589 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.34□□□□□ -1.71
CLCN3P51790 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.34□□□□□ -1.71
CLCN3P51790 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLCN3P51790 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCN3P51790 RPL5P24-201ENST00000463742 885 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.34□□□□□ -1.71
CLCN3P51790 AP002812.1-201ENST00000495378 474 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 HMGB1P21-201ENST00000502313 581 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 AC025554.1-201ENST00000505641 188 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.34□□□□□ -1.71
CLCN3P51790 AC093755.1-201ENST00000512950 1023 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 RNU6-885P-201ENST00000516607 104 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 AC087808.1-201ENST00000520501 361 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 ARL2BPP5-201ENST00000523141 481 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCN3P51790 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCN3P51790 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCN3P51790 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.34□□□□□ -1.71
CLCN3P51790 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCN3P51790 MTCYBP27-201ENST00000555160 670 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCN3P51790 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.34□□□□□ -1.71
CLCN3P51790 AC093519.1-201ENST00000566109 298 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCN3P51790 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.34□□□□□ -1.71
CLCN3P51790 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.34□□□□□ -1.71
CLCN3P51790 AC007349.4-201ENST00000608114 532 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCN3P51790 AC009237.17-201ENST00000618111 748 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 AC022509.4-201ENST00000621404 572 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 CR392039.5-201ENST00000623201 510 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 AC079416.3-201ENST00000624479 549 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.34□□□□□ -1.71
CLCN3P51790 AC026634.1-201ENST00000634369 198 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 AC068620.4-201ENST00000636730 1182 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLCN3P51790 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.34□□□□□ -1.71
CLCN3P51790 Z99496.1-201ENST00000469424 1477 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 DDX18P3-201ENST00000404856 2007 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 AC011978.2-201ENST00000569835 2054 ntBASIC4.34□□□□□ -1.71
CLCN3P51790 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CLCN3P51790 SAGE4P-201ENST00000442271 3381 ntBASIC4.34□□□□□ -1.72
CLCN3P51790 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CLCN3P51790 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLCN3P51790 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
CLCN3P51790 MTND5P31-201ENST00000419366 1374 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms