Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AC118282.1-201ENST00000506408 765 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 ARL4AP2-201ENST00000507378 601 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CASQ1P31415 AC119751.1-201ENST00000513357 765 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.65□□□□□ -1.83
CASQ1P31415 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.65□□□□□ -1.83
CASQ1P31415 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.65□□□□□ -1.83
CASQ1P31415 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.65□□□□□ -1.83
CASQ1P31415 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.65□□□□□ -1.83
CASQ1P31415 OR4G1P-201ENST00000588632 938 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 AC024940.4-201ENST00000605507 246 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 AL391597.1-201ENST00000618707 694 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 AC091046.2-201ENST00000620775 665 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CASQ1P31415 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CASQ1P31415 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CASQ1P31415 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CASQ1P31415 SNORA62-201ENST00000365493 153 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 MIR30B-201ENST00000384850 88 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 RPS4XP9-201ENST00000405151 780 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 AL445189.1-201ENST00000405722 338 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.64□□□□□ -1.83
CASQ1P31415 RNA5SP44-201ENST00000410446 133 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.64□□□□□ -1.83
CASQ1P31415 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.64□□□□□ -1.83
CASQ1P31415 SETP8-201ENST00000435341 628 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 AC073143.1-201ENST00000436316 395 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.64□□□□□ -1.83
CASQ1P31415 snoU13.3-201ENST00000459441 104 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 HMGB1P25-201ENST00000468402 607 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.64□□□□□ -1.83
CASQ1P31415 VN1R105P-201ENST00000486595 910 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.64□□□□□ -1.83
CASQ1P31415 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.64□□□□□ -1.83
CASQ1P31415 HMGB1P47-201ENST00000511281 589 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 RNA5SP217-201ENST00000515959 91 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 RNU1-143P-201ENST00000516296 146 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.64□□□□□ -1.83
CASQ1P31415 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.64□□□□□ -1.83
CASQ1P31415 AC025884.1-201ENST00000556034 378 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.64□□□□□ -1.83
CASQ1P31415 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.64□□□□□ -1.83
CASQ1P31415 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.64□□□□□ -1.83
CASQ1P31415 AC067852.3-201ENST00000589177 561 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 AC008962.1-201ENST00000605729 304 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 U1.23-201ENST00000610293 146 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 RNU1-68P-201ENST00000615382 146 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CASQ1P31415 U1.39-201ENST00000621562 146 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 U4.6-201ENST00000621618 127 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 AC090617.7-201ENST00000623952 126 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.64□□□□□ -1.83
CASQ1P31415 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.64□□□□□ -1.83
CASQ1P31415 MIR492-201ENST00000638676 116 ntBASIC3.64□□□□□ -1.83
CASQ1P31415 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CASQ1P31415 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.63□□□□□ -1.83
CASQ1P31415 AC107081.3-201ENST00000612715 2034 ntBASIC3.63□□□□□ -1.83
CASQ1P31415 OR52E6-202ENST00000379946 954 ntBASIC3.63□□□□□ -1.83
CASQ1P31415 AL031121.1-201ENST00000406553 254 ntBASIC3.63□□□□□ -1.83
CASQ1P31415 RNU6-564P-201ENST00000410983 104 ntBASIC3.63□□□□□ -1.83
CASQ1P31415 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.63□□□□□ -1.83
CASQ1P31415 RPL32P35-201ENST00000415214 394 ntBASIC3.63□□□□□ -1.83
CASQ1P31415 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.63□□□□□ -1.83
CASQ1P31415 AC104332.2-201ENST00000429959 156 ntBASIC3.63□□□□□ -1.83
CASQ1P31415 ETF1P3-201ENST00000430422 1160 ntBASIC3.63□□□□□ -1.83
CASQ1P31415 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.63□□□□□ -1.83
CASQ1P31415 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CASQ1P31415 OR2AF1P-201ENST00000454899 889 ntBASIC3.63□□□□□ -1.83
CASQ1P31415 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.63□□□□□ -1.83
CASQ1P31415 RPS7P7-201ENST00000463499 571 ntBASIC3.63□□□□□ -1.83
CASQ1P31415 AC091564.1-201ENST00000464563 479 ntBASIC3.63□□□□□ -1.83
CASQ1P31415 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.63□□□□□ -1.83
CASQ1P31415 AC093278.1-201ENST00000494700 600 ntBASIC3.63□□□□□ -1.83
CASQ1P31415 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CASQ1P31415 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.63□□□□□ -1.83
CASQ1P31415 RN7SKP116-201ENST00000516902 319 ntBASIC3.63□□□□□ -1.83
CASQ1P31415 SCARNA20.6-201ENST00000517251 106 ntBASIC3.63□□□□□ -1.83
CASQ1P31415 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.63□□□□□ -1.83
CASQ1P31415 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.63□□□□□ -1.83
CASQ1P31415 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.63□□□□□ -1.83
CASQ1P31415 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.63□□□□□ -1.83
CASQ1P31415 AC010653.1-201ENST00000571108 881 ntBASIC3.63□□□□□ -1.83
CASQ1P31415 AC087499.8-201ENST00000578406 226 ntBASIC3.63□□□□□ -1.83
CASQ1P31415 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.63□□□□□ -1.83
CASQ1P31415 MIR3939-201ENST00000582614 106 ntBASIC3.63□□□□□ -1.83
CASQ1P31415 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.63□□□□□ -1.83
CASQ1P31415 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.63□□□□□ -1.83
CASQ1P31415 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CASQ1P31415 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CASQ1P31415 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CASQ1P31415 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CASQ1P31415 AL359893.1-201ENST00000447628 1580 ntBASIC3.63□□□□□ -1.83
CASQ1P31415 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CASQ1P31415 AC123912.3-201ENST00000600907 1367 ntBASIC3.63□□□□□ -1.83
CASQ1P31415 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.62□□□□□ -1.83
CASQ1P31415 METTL21EP-201ENST00000298105 713 ntBASIC3.62□□□□□ -1.83
CASQ1P31415 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CASQ1P31415 RSL24D1P1-201ENST00000404972 493 ntBASIC3.62□□□□□ -1.83
CASQ1P31415 AC007394.1-201ENST00000421941 531 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms