Protein–RNA interactions for Protein: P28358

HOXD10, Homeobox protein Hox-D10, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10P28358 RANP4-201ENST00000413361 655 ntBASIC4.04□□□□□ -1.76
HOXD10P28358 AL049610.1-201ENST00000423374 372 ntBASIC4.04□□□□□ -1.76
HOXD10P28358 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXD10P28358 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.04□□□□□ -1.76
HOXD10P28358 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXD10P28358 HLA-N-201ENST00000437516 135 ntBASIC4.04□□□□□ -1.76
HOXD10P28358 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXD10P28358 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.04□□□□□ -1.76
HOXD10P28358 RPL21P104-201ENST00000464143 478 ntBASIC4.04□□□□□ -1.76
HOXD10P28358 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXD10P28358 AC011825.1-201ENST00000484967 388 ntBASIC4.04□□□□□ -1.76
HOXD10P28358 SUMO1P1-201ENST00000497904 306 ntBASIC4.04□□□□□ -1.76
HOXD10P28358 AC110792.2-201ENST00000510278 224 ntBASIC4.04□□□□□ -1.76
HOXD10P28358 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.04□□□□□ -1.76
HOXD10P28358 RNU6-1231P-201ENST00000517185 103 ntBASIC4.04□□□□□ -1.76
HOXD10P28358 AL731537.2-201ENST00000561565 951 ntBASIC4.04□□□□□ -1.76
HOXD10P28358 MIR5004-201ENST00000579078 107 ntBASIC4.04□□□□□ -1.76
HOXD10P28358 AC010928.3-201ENST00000587712 541 ntBASIC4.04□□□□□ -1.76
HOXD10P28358 AL021368.1-201ENST00000607490 540 ntBASIC4.04□□□□□ -1.76
HOXD10P28358 AC055764.2-201ENST00000610089 670 ntBASIC4.04□□□□□ -1.76
HOXD10P28358 MIR7973-1-201ENST00000614683 76 ntBASIC4.04□□□□□ -1.76
HOXD10P28358 AL732618.1-201ENST00000623251 301 ntBASIC4.04□□□□□ -1.76
HOXD10P28358 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXD10P28358 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
HOXD10P28358 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXD10P28358 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD10P28358 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
HOXD10P28358 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD10P28358 UBE3AP2-201ENST00000429033 2259 ntBASIC4.04□□□□□ -1.76
HOXD10P28358 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD10P28358 Z83843.1-201ENST00000604070 3685 ntBASIC4.03□□□□□ -1.76
HOXD10P28358 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXD10P28358 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HOXD10P28358 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXD10P28358 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXD10P28358 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXD10P28358 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXD10P28358 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HOXD10P28358 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXD10P28358 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HOXD10P28358 RNA5SP322-201ENST00000363617 119 ntBASIC4.03□□□□□ -1.76
HOXD10P28358 USP9YP19-201ENST00000412165 485 ntBASIC4.03□□□□□ -1.76
HOXD10P28358 DBIP2-201ENST00000419076 262 ntBASIC4.03□□□□□ -1.76
HOXD10P28358 MTND4LP7-201ENST00000431728 294 ntBASIC4.03□□□□□ -1.76
HOXD10P28358 RPL21P112-201ENST00000434403 463 ntBASIC4.03□□□□□ -1.76
HOXD10P28358 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
HOXD10P28358 AL691517.1-201ENST00000440833 1235 ntBASIC4.03□□□□□ -1.76
HOXD10P28358 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.03□□□□□ -1.76
HOXD10P28358 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD10P28358 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD10P28358 RPL7P48-201ENST00000461513 746 ntBASIC4.03□□□□□ -1.76
HOXD10P28358 AC025181.1-201ENST00000477507 416 ntBASIC4.03□□□□□ -1.76
HOXD10P28358 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXD10P28358 AC110794.1-201ENST00000505816 425 ntBASIC4.03□□□□□ -1.76
HOXD10P28358 MTCO1P31-201ENST00000506355 492 ntBASIC4.03□□□□□ -1.76
HOXD10P28358 MTND2P31-201ENST00000512602 616 ntBASIC4.03□□□□□ -1.76
HOXD10P28358 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXD10P28358 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD10P28358 UBTFL9-201ENST00000534504 1148 ntBASIC4.03□□□□□ -1.76
HOXD10P28358 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD10P28358 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXD10P28358 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD10P28358 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.76
HOXD10P28358 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXD10P28358 U4.6-201ENST00000621618 127 ntBASIC4.03□□□□□ -1.76
HOXD10P28358 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.02□□□□□ -1.77
HOXD10P28358 RPS4XP5-202ENST00000449995 1334 ntBASIC4.02□□□□□ -1.77
HOXD10P28358 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HOXD10P28358 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD10P28358 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD10P28358 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD10P28358 RNU6-7-201ENST00000364784 107 ntBASIC4.02□□□□□ -1.77
HOXD10P28358 RNU6-8-201ENST00000365467 107 ntBASIC4.02□□□□□ -1.77
HOXD10P28358 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
HOXD10P28358 RNU6-883P-201ENST00000384597 107 ntBASIC4.02□□□□□ -1.77
HOXD10P28358 AP000567.1-201ENST00000406413 156 ntBASIC4.02□□□□□ -1.77
HOXD10P28358 RN7SKP111-201ENST00000410349 271 ntBASIC4.02□□□□□ -1.77
HOXD10P28358 EI24P1-201ENST00000416584 867 ntBASIC4.02□□□□□ -1.77
HOXD10P28358 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.02□□□□□ -1.77
HOXD10P28358 FAM204CP-201ENST00000424489 642 ntBASIC4.02□□□□□ -1.77
HOXD10P28358 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXD10P28358 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXD10P28358 NEK4P1-201ENST00000433383 879 ntBASIC4.02□□□□□ -1.77
HOXD10P28358 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXD10P28358 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXD10P28358 MTCO3P43-201ENST00000440974 771 ntBASIC4.02□□□□□ -1.77
HOXD10P28358 RPL29P29-201ENST00000448725 423 ntBASIC4.02□□□□□ -1.77
HOXD10P28358 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXD10P28358 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXD10P28358 AC023598.1-201ENST00000472521 361 ntBASIC4.02□□□□□ -1.77
HOXD10P28358 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXD10P28358 RPL31P61-201ENST00000496160 376 ntBASIC4.02□□□□□ -1.77
HOXD10P28358 AL035404.1-201ENST00000497982 568 ntBASIC4.02□□□□□ -1.77
HOXD10P28358 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXD10P28358 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXD10P28358 IGKV2-26-201ENST00000518305 343 ntBASIC4.02□□□□□ -1.77
HOXD10P28358 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXD10P28358 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD10P28358 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXD10P28358 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms